==41654== Memcheck, a memory error detector ==41654== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41654== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41654== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestExtendedBidomainProblem -malloc_debug -malloc_dump -memory_info ==41654== Parent PID: 24330 ==41654== ==41654== ==41654== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41654== Open file descriptor 12: ==41654== at 0xA9C10FD: pipe (pipe.c:29) ==41654== by 0x1435E07D: ??? ==41654== by 0xD95E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41654== by 0xA2C9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41654== by 0xA262D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41654== by 0xB133D38: PetscInitialize (pinit.c:924) ==41654== by 0xA16EE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41654== by 0xA16EEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41654== by 0x124904: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41654== by 0x11F9B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41654== by 0x12261C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41654== by 0x122517: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41654== by 0x122B2B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41654== by 0x11E1B5: main (TestExtendedBidomainProblem.cpp:18) ==41654== ==41654== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41654== at 0xA9C5A9C: __open_nocancel (open64_nocancel.c:39) ==41654== by 0xA949BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41654== by 0xA1A6822: ??? ==41654== by 0xA1A696F: ??? ==41654== by 0xDA036DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41654== by 0xDA03938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41654== by 0xD9B9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41654== by 0xD95E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41654== by 0xA2C9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41654== by 0xA262D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41654== by 0xB133D38: PetscInitialize (pinit.c:924) ==41654== by 0xA16EE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41654== by 0xA16EEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41654== by 0x124904: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41654== by 0x11F9B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41654== by 0x12261C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41654== by 0x122517: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41654== by 0x122B2B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41654== by 0x11E1B5: main (TestExtendedBidomainProblem.cpp:18) ==41654== ==41654== Open file descriptor 145: ==41654== ==41654== ==41654== Open file descriptor 142: ==41654== ==41654== ==41654== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestExtendedBidomainProblem_valgrind.txt ==41654== ==41654== ==41654== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41654== ==41654== ==41654== ==41654== HEAP SUMMARY: ==41654== in use at exit: 35,606 bytes in 295 blocks ==41654== total heap usage: 2,357,041 allocs, 2,356,746 frees, 1,137,235,060 bytes allocated ==41654== ==41654== LEAK SUMMARY: ==41654== definitely lost: 0 bytes in 0 blocks ==41654== indirectly lost: 0 bytes in 0 blocks ==41654== possibly lost: 0 bytes in 0 blocks ==41654== still reachable: 24 bytes in 2 blocks ==41654== suppressed: 35,582 bytes in 293 blocks ==41654== Reachable blocks (those to which a pointer was found) are not shown. ==41654== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41654== ==41654== For lists of detected and suppressed errors, rerun with: -s ==41654== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 36 from 31)