==42018== Memcheck, a memory error detector ==42018== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==42018== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==42018== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCvodeWithJacobian -malloc_debug -malloc_dump -memory_info ==42018== Parent PID: 24357 ==42018== ==42018== ==42018== FILE DESCRIPTORS: 9 open (3 std) at exit. ==42018== Open file descriptor 12: ==42018== at 0x9C910FD: pipe (pipe.c:29) ==42018== by 0x1436107D: ??? ==42018== by 0xEE564CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42018== by 0x98DE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42018== by 0x9877D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42018== by 0x8209D38: PetscInitialize (pinit.c:924) ==42018== by 0x9783E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42018== by 0x9783EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42018== by 0x117769: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==42018== by 0x1133B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42018== by 0x1155A2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42018== by 0x11549E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42018== by 0x115AB1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42018== by 0x111BB5: main (TestCvodeWithJacobian.cpp:18) ==42018== ==42018== Open file descriptor 8: /dev/shm/open_mpi.0000 ==42018== at 0x9C95A9C: __open_nocancel (open64_nocancel.c:39) ==42018== by 0x9C19BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==42018== by 0x97BB822: ??? ==42018== by 0x97BB96F: ??? ==42018== by 0xEEFB6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42018== by 0xEEFB938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42018== by 0xEEB1922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42018== by 0xEE562DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42018== by 0x98DE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42018== by 0x9877D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42018== by 0x8209D38: PetscInitialize (pinit.c:924) ==42018== by 0x9783E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42018== by 0x9783EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42018== by 0x117769: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==42018== by 0x1133B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42018== by 0x1155A2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42018== by 0x11549E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42018== by 0x115AB1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42018== by 0x111BB5: main (TestCvodeWithJacobian.cpp:18) ==42018== ==42018== Open file descriptor 145: ==42018== ==42018== ==42018== Open file descriptor 142: ==42018== ==42018== ==42018== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCvodeWithJacobian_valgrind.txt ==42018== ==42018== ==42018== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==42018== ==42018== ==42018== ==42018== HEAP SUMMARY: ==42018== in use at exit: 15,355 bytes in 46 blocks ==42018== total heap usage: 57,607 allocs, 57,561 frees, 10,423,846 bytes allocated ==42018== ==42018== LEAK SUMMARY: ==42018== definitely lost: 0 bytes in 0 blocks ==42018== indirectly lost: 0 bytes in 0 blocks ==42018== possibly lost: 0 bytes in 0 blocks ==42018== still reachable: 24 bytes in 2 blocks ==42018== suppressed: 15,331 bytes in 44 blocks ==42018== Reachable blocks (those to which a pointer was found) are not shown. ==42018== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==42018== ==42018== For lists of detected and suppressed errors, rerun with: -s ==42018== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 29 from 29)