==25818== Memcheck, a memory error detector ==25818== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25818== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25818== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellBasedParabolicPdes -malloc_debug -malloc_dump -memory_info ==25818== Parent PID: 24353 ==25818== ==25818== ==25818== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25818== Open file descriptor 12: ==25818== at 0x10E600FD: pipe (pipe.c:29) ==25818== by 0x1973507D: ??? ==25818== by 0x14CEC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25818== by 0x109C6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25818== by 0x1095FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25818== by 0xF656D38: PetscInitialize (pinit.c:924) ==25818== by 0xF180E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25818== by 0xF180EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25818== by 0x12E523: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25818== by 0x12929D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25818== by 0x12BE20: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25818== by 0x12BCC0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25818== by 0x12C357: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25818== by 0x1276C5: main (TestCellBasedParabolicPdes.cpp:19) ==25818== ==25818== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25818== at 0x10E64A9C: __open_nocancel (open64_nocancel.c:39) ==25818== by 0x10DE8BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25818== by 0xF1B8822: ??? ==25818== by 0xF1B896F: ??? ==25818== by 0x14D916DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25818== by 0x14D91938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25818== by 0x14D47922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25818== by 0x14CEC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25818== by 0x109C6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25818== by 0x1095FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25818== by 0xF656D38: PetscInitialize (pinit.c:924) ==25818== by 0xF180E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25818== by 0xF180EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25818== by 0x12E523: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25818== by 0x12929D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25818== by 0x12BE20: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25818== by 0x12BCC0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25818== by 0x12C357: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25818== by 0x1276C5: main (TestCellBasedParabolicPdes.cpp:19) ==25818== ==25818== Open file descriptor 145: ==25818== ==25818== ==25818== Open file descriptor 142: ==25818== ==25818== ==25818== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellBasedParabolicPdes_valgrind.txt ==25818== ==25818== ==25818== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25818== ==25818== ==25818== ==25818== HEAP SUMMARY: ==25818== in use at exit: 15,444 bytes in 51 blocks ==25818== total heap usage: 57,645 allocs, 57,594 frees, 10,466,141 bytes allocated ==25818== ==25818== LEAK SUMMARY: ==25818== definitely lost: 0 bytes in 0 blocks ==25818== indirectly lost: 0 bytes in 0 blocks ==25818== possibly lost: 0 bytes in 0 blocks ==25818== still reachable: 56 bytes in 3 blocks ==25818== suppressed: 15,388 bytes in 48 blocks ==25818== Reachable blocks (those to which a pointer was found) are not shown. ==25818== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25818== ==25818== For lists of detected and suppressed errors, rerun with: -s ==25818== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)