==25680== Memcheck, a memory error detector ==25680== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25680== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25680== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCell -malloc_debug -malloc_dump -memory_info ==25680== Parent PID: 24353 ==25680== ==25680== ==25680== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25680== Open file descriptor 12: ==25680== at 0xED880FD: pipe (pipe.c:29) ==25680== by 0x1973607D: ??? ==25680== by 0x13C874CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25680== by 0xE9D7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25680== by 0xE970D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25680== by 0xD644D38: PetscInitialize (pinit.c:924) ==25680== by 0xD516E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25680== by 0xD516EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25680== by 0x1291DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25680== by 0x123ECD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25680== by 0x126DAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25680== by 0x126C4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25680== by 0x1272E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25680== by 0x1222F5: main (TestCell.cpp:19) ==25680== ==25680== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25680== at 0xED8CA9C: __open_nocancel (open64_nocancel.c:39) ==25680== by 0xED10BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25680== by 0xE8CE822: ??? ==25680== by 0xE8CE96F: ??? ==25680== by 0x13D2C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25680== by 0x13D2C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25680== by 0x13CE2922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25680== by 0x13C872DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25680== by 0xE9D7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25680== by 0xE970D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25680== by 0xD644D38: PetscInitialize (pinit.c:924) ==25680== by 0xD516E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25680== by 0xD516EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25680== by 0x1291DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25680== by 0x123ECD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25680== by 0x126DAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25680== by 0x126C4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25680== by 0x1272E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25680== by 0x1222F5: main (TestCell.cpp:19) ==25680== ==25680== Open file descriptor 145: ==25680== ==25680== ==25680== Open file descriptor 142: ==25680== ==25680== ==25680== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCell_valgrind.txt ==25680== ==25680== ==25680== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25680== ==25680== ==25680== ==25680== HEAP SUMMARY: ==25680== in use at exit: 15,499 bytes in 48 blocks ==25680== total heap usage: 5,167,070 allocs, 5,167,022 frees, 486,972,783 bytes allocated ==25680== ==25680== LEAK SUMMARY: ==25680== definitely lost: 0 bytes in 0 blocks ==25680== indirectly lost: 0 bytes in 0 blocks ==25680== possibly lost: 0 bytes in 0 blocks ==25680== still reachable: 184 bytes in 4 blocks ==25680== suppressed: 15,315 bytes in 44 blocks ==25680== Reachable blocks (those to which a pointer was found) are not shown. ==25680== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25680== ==25680== For lists of detected and suppressed errors, rerun with: -s ==25680== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 29 from 29)