==26355== Memcheck, a memory error detector ==26355== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26355== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26355== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==26355== Parent PID: 24353 ==26355== ==26355== ==26355== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26355== Open file descriptor 12: ==26355== at 0xF9AB0FD: pipe (pipe.c:29) ==26355== by 0x1973507D: ??? ==26355== by 0x12B784CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26355== by 0x102A3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26355== by 0x1023CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26355== by 0x103E8D38: PetscInitialize (pinit.c:924) ==26355== by 0xF180E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26355== by 0xF180EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26355== by 0x2F3CF0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26355== by 0x2EA679: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26355== by 0x2EEFB0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26355== by 0x2EEE50: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26355== by 0x2EF4E7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26355== by 0x2E8A95: main (TestMeshBasedCellPopulation.cpp:19) ==26355== ==26355== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26355== at 0xF9AFA9C: __open_nocancel (open64_nocancel.c:39) ==26355== by 0xF933BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26355== by 0xF1B8822: ??? ==26355== by 0xF1B896F: ??? ==26355== by 0x12C1D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26355== by 0x12C1D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26355== by 0x12BD3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26355== by 0x12B782DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26355== by 0x102A3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26355== by 0x1023CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26355== by 0x103E8D38: PetscInitialize (pinit.c:924) ==26355== by 0xF180E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26355== by 0xF180EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26355== by 0x2F3CF0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26355== by 0x2EA679: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26355== by 0x2EEFB0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26355== by 0x2EEE50: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26355== by 0x2EF4E7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26355== by 0x2E8A95: main (TestMeshBasedCellPopulation.cpp:19) ==26355== ==26355== Open file descriptor 145: ==26355== ==26355== ==26355== Open file descriptor 142: ==26355== ==26355== ==26355== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMeshBasedCellPopulation_valgrind.txt ==26355== ==26355== ==26355== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26355== ==26355== ==26355== ==26355== HEAP SUMMARY: ==26355== in use at exit: 15,444 bytes in 51 blocks ==26355== total heap usage: 131,498 allocs, 131,447 frees, 34,738,054 bytes allocated ==26355== ==26355== LEAK SUMMARY: ==26355== definitely lost: 0 bytes in 0 blocks ==26355== indirectly lost: 0 bytes in 0 blocks ==26355== possibly lost: 0 bytes in 0 blocks ==26355== still reachable: 56 bytes in 3 blocks ==26355== suppressed: 15,388 bytes in 48 blocks ==26355== Reachable blocks (those to which a pointer was found) are not shown. ==26355== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26355== ==26355== For lists of detected and suppressed errors, rerun with: -s ==26355== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)