==26953== Memcheck, a memory error detector ==26953== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26953== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26953== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==26953== Parent PID: 24353 ==26953== ==26953== ==26953== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26953== Open file descriptor 12: ==26953== at 0xF9AB0FD: pipe (pipe.c:29) ==26953== by 0x1973507D: ??? ==26953== by 0x12B784CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26953== by 0x102A3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26953== by 0x1023CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26953== by 0x103E8D38: PetscInitialize (pinit.c:924) ==26953== by 0xF180E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26953== by 0xF180EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26953== by 0x2136B0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26953== by 0x20AE59: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26953== by 0x20EAA8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26953== by 0x20E948: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26953== by 0x20EFDF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26953== by 0x209275: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==26953== ==26953== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26953== at 0xF9AFA9C: __open_nocancel (open64_nocancel.c:39) ==26953== by 0xF933BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26953== by 0xF1B8822: ??? ==26953== by 0xF1B896F: ??? ==26953== by 0x12C1D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26953== by 0x12C1D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26953== by 0x12BD3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26953== by 0x12B782DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26953== by 0x102A3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26953== by 0x1023CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26953== by 0x103E8D38: PetscInitialize (pinit.c:924) ==26953== by 0xF180E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26953== by 0xF180EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26953== by 0x2136B0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26953== by 0x20AE59: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26953== by 0x20EAA8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26953== by 0x20E948: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26953== by 0x20EFDF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26953== by 0x209275: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==26953== ==26953== Open file descriptor 145: ==26953== ==26953== ==26953== Open file descriptor 142: ==26953== ==26953== ==26953== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithNodeBasedCellPopulation_valgrind.txt ==26953== ==26953== ==26953== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26953== ==26953== ==26953== ==26953== HEAP SUMMARY: ==26953== in use at exit: 15,403 bytes in 48 blocks ==26953== total heap usage: 18,260,379 allocs, 18,260,331 frees, 28,715,241,151 bytes allocated ==26953== ==26953== LEAK SUMMARY: ==26953== definitely lost: 0 bytes in 0 blocks ==26953== indirectly lost: 0 bytes in 0 blocks ==26953== possibly lost: 0 bytes in 0 blocks ==26953== still reachable: 88 bytes in 4 blocks ==26953== suppressed: 15,315 bytes in 44 blocks ==26953== Reachable blocks (those to which a pointer was found) are not shown. ==26953== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26953== ==26953== For lists of detected and suppressed errors, rerun with: -s ==26953== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 29 from 29)