==26492== Memcheck, a memory error detector ==26492== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26492== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26492== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==26492== Parent PID: 24353 ==26492== ==26492== ==26492== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26492== Open file descriptor 12: ==26492== at 0x10D790FD: pipe (pipe.c:29) ==26492== by 0x1973507D: ??? ==26492== by 0x14CEC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26492== by 0x109C6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26492== by 0x1095FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26492== by 0xF656D38: PetscInitialize (pinit.c:924) ==26492== by 0xF180E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26492== by 0xF180EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26492== by 0x3F7569: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26492== by 0x3EC0F9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26492== by 0x3F2114: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26492== by 0x3F1FB4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26492== by 0x3F264B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26492== by 0x3EA515: main (TestVertexBasedCellPopulation.cpp:19) ==26492== ==26492== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26492== at 0x10D7DA9C: __open_nocancel (open64_nocancel.c:39) ==26492== by 0x10D01BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26492== by 0xF1B8822: ??? ==26492== by 0xF1B896F: ??? ==26492== by 0x14D916DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26492== by 0x14D91938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26492== by 0x14D47922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26492== by 0x14CEC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26492== by 0x109C6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26492== by 0x1095FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26492== by 0xF656D38: PetscInitialize (pinit.c:924) ==26492== by 0xF180E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26492== by 0xF180EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26492== by 0x3F7569: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26492== by 0x3EC0F9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26492== by 0x3F2114: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26492== by 0x3F1FB4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26492== by 0x3F264B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26492== by 0x3EA515: main (TestVertexBasedCellPopulation.cpp:19) ==26492== ==26492== Open file descriptor 145: ==26492== ==26492== ==26492== Open file descriptor 142: ==26492== ==26492== ==26492== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVertexBasedCellPopulation_valgrind.txt ==26492== ==26492== ==26492== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26492== ==26492== ==26492== ==26492== HEAP SUMMARY: ==26492== in use at exit: 15,444 bytes in 51 blocks ==26492== total heap usage: 153,779 allocs, 153,728 frees, 18,196,259 bytes allocated ==26492== ==26492== LEAK SUMMARY: ==26492== definitely lost: 0 bytes in 0 blocks ==26492== indirectly lost: 0 bytes in 0 blocks ==26492== possibly lost: 0 bytes in 0 blocks ==26492== still reachable: 56 bytes in 3 blocks ==26492== suppressed: 15,388 bytes in 48 blocks ==26492== Reachable blocks (those to which a pointer was found) are not shown. ==26492== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26492== ==26492== For lists of detected and suppressed errors, rerun with: -s ==26492== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)