==25884== Memcheck, a memory error detector ==25884== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25884== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25884== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestParabolicBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==25884== Parent PID: 24409 ==25884== ==25884== ==25884== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25884== Open file descriptor 12: ==25884== at 0x1110E0FD: pipe (pipe.c:29) ==25884== by 0x1972E07D: ??? ==25884== by 0x14CE34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25884== by 0x10D5B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25884== by 0x10CF4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25884== by 0xF9EBD38: PetscInitialize (pinit.c:924) ==25884== by 0xF515E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25884== by 0xF515EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25884== by 0x1368E9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25884== by 0x131283: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25884== by 0x133EC6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25884== by 0x133DC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25884== by 0x1343D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25884== by 0x12FA85: main (TestParabolicBoxDomainPdeModifier.cpp:18) ==25884== ==25884== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25884== at 0x11112A9C: __open_nocancel (open64_nocancel.c:39) ==25884== by 0x11096BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25884== by 0xF54D822: ??? ==25884== by 0xF54D96F: ??? ==25884== by 0x14D886DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25884== by 0x14D88938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25884== by 0x14D3E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25884== by 0x14CE32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25884== by 0x10D5B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25884== by 0x10CF4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25884== by 0xF9EBD38: PetscInitialize (pinit.c:924) ==25884== by 0xF515E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25884== by 0xF515EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25884== by 0x1368E9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25884== by 0x131283: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25884== by 0x133EC6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25884== by 0x133DC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25884== by 0x1343D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25884== by 0x12FA85: main (TestParabolicBoxDomainPdeModifier.cpp:18) ==25884== ==25884== Open file descriptor 145: ==25884== ==25884== ==25884== Open file descriptor 142: ==25884== ==25884== ==25884== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestParabolicBoxDomainPdeModifier_valgrind.txt ==25884== ==25884== ==25884== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25884== ==25884== ==25884== ==25884== HEAP SUMMARY: ==25884== in use at exit: 15,371 bytes in 47 blocks ==25884== total heap usage: 3,629,470 allocs, 3,629,423 frees, 404,720,138 bytes allocated ==25884== ==25884== LEAK SUMMARY: ==25884== definitely lost: 0 bytes in 0 blocks ==25884== indirectly lost: 0 bytes in 0 blocks ==25884== possibly lost: 0 bytes in 0 blocks ==25884== still reachable: 56 bytes in 3 blocks ==25884== suppressed: 15,315 bytes in 44 blocks ==25884== Reachable blocks (those to which a pointer was found) are not shown. ==25884== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25884== ==25884== For lists of detected and suppressed errors, rerun with: -s ==25884== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 29 from 29)