==37780== Memcheck, a memory error detector ==37780== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==37780== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==37780== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPottsBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==37780== Parent PID: 24382 ==37780== ==37780== ==37780== FILE DESCRIPTORS: 9 open (3 std) at exit. ==37780== Open file descriptor 12: ==37780== at 0xF9A30FD: pipe (pipe.c:29) ==37780== by 0x1972E07D: ??? ==37780== by 0x12B784CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==37780== by 0x1029B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==37780== by 0x10234D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==37780== by 0x103E0D38: PetscInitialize (pinit.c:924) ==37780== by 0xF178E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==37780== by 0xF178EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==37780== by 0x1D7694: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==37780== by 0x1CF179: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==37780== by 0x1D29F8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==37780== by 0x1D2898: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==37780== by 0x1D2F2F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==37780== by 0x1CD595: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==37780== ==37780== Open file descriptor 8: /dev/shm/open_mpi.0000 ==37780== at 0xF9A7A9C: __open_nocancel (open64_nocancel.c:39) ==37780== by 0xF92BBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==37780== by 0xF1B0822: ??? ==37780== by 0xF1B096F: ??? ==37780== by 0x12C1D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==37780== by 0x12C1D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==37780== by 0x12BD3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==37780== by 0x12B782DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==37780== by 0x1029B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==37780== by 0x10234D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==37780== by 0x103E0D38: PetscInitialize (pinit.c:924) ==37780== by 0xF178E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==37780== by 0xF178EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==37780== by 0x1D7694: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==37780== by 0x1CF179: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==37780== by 0x1D29F8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==37780== by 0x1D2898: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==37780== by 0x1D2F2F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==37780== by 0x1CD595: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==37780== ==37780== Open file descriptor 145: ==37780== ==37780== ==37780== Open file descriptor 142: ==37780== ==37780== ==37780== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPottsBasedCellPopulation_valgrind.txt ==37780== ==37780== ==37780== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==37780== ==37780== ==37780== ==37780== HEAP SUMMARY: ==37780== in use at exit: 15,387 bytes in 48 blocks ==37780== total heap usage: 11,666,107 allocs, 11,666,059 frees, 875,971,242 bytes allocated ==37780== ==37780== LEAK SUMMARY: ==37780== definitely lost: 0 bytes in 0 blocks ==37780== indirectly lost: 0 bytes in 0 blocks ==37780== possibly lost: 0 bytes in 0 blocks ==37780== still reachable: 72 bytes in 4 blocks ==37780== suppressed: 15,315 bytes in 44 blocks ==37780== Reachable blocks (those to which a pointer was found) are not shown. ==37780== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==37780== ==37780== For lists of detected and suppressed errors, rerun with: -s ==37780== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 29 from 29)