==40619== Memcheck, a memory error detector ==40619== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40619== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40619== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestWntCellCycleOdeSystem -malloc_debug -malloc_dump -memory_info ==40619== Parent PID: 24382 ==40619== ==40619== ==40619== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40619== Open file descriptor 12: ==40619== at 0x108C70FD: pipe (pipe.c:29) ==40619== by 0x1B3EF07D: ??? ==40619== by 0x155904CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40619== by 0x10514418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40619== by 0x104ADD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40619== by 0x6277D38: PetscInitialize (pinit.c:924) ==40619== by 0x103F6E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40619== by 0x103F6EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40619== by 0x1264BD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40619== by 0x1217C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40619== by 0x123E3A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40619== by 0x123D36: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40619== by 0x124349: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40619== by 0x11FFC5: main (TestWntCellCycleOdeSystem.cpp:18) ==40619== ==40619== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40619== at 0x108CBA9C: __open_nocancel (open64_nocancel.c:39) ==40619== by 0x1084FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40619== by 0x611C822: ??? ==40619== by 0x611C96F: ??? ==40619== by 0x156356DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40619== by 0x15635938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40619== by 0x155EB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40619== by 0x155902DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40619== by 0x10514418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40619== by 0x104ADD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40619== by 0x6277D38: PetscInitialize (pinit.c:924) ==40619== by 0x103F6E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40619== by 0x103F6EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40619== by 0x1264BD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40619== by 0x1217C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40619== by 0x123E3A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40619== by 0x123D36: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40619== by 0x124349: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40619== by 0x11FFC5: main (TestWntCellCycleOdeSystem.cpp:18) ==40619== ==40619== Open file descriptor 145: ==40619== ==40619== ==40619== Open file descriptor 142: ==40619== ==40619== ==40619== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestWntCellCycleOdeSystem_valgrind.txt ==40619== ==40619== ==40619== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40619== ==40619== ==40619== ==40619== HEAP SUMMARY: ==40619== in use at exit: 15,428 bytes in 50 blocks ==40619== total heap usage: 169,134 allocs, 169,084 frees, 87,707,166 bytes allocated ==40619== ==40619== LEAK SUMMARY: ==40619== definitely lost: 0 bytes in 0 blocks ==40619== indirectly lost: 0 bytes in 0 blocks ==40619== possibly lost: 0 bytes in 0 blocks ==40619== still reachable: 24 bytes in 2 blocks ==40619== suppressed: 15,404 bytes in 48 blocks ==40619== Reachable blocks (those to which a pointer was found) are not shown. ==40619== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40619== ==40619== For lists of detected and suppressed errors, rerun with: -s ==40619== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)