==25748== Memcheck, a memory error detector ==25748== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25748== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25748== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellCycleModelOdeSolver -malloc_debug -malloc_dump -memory_info ==25748== Parent PID: 24384 ==25748== ==25748== ==25748== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25748== Open file descriptor 12: ==25748== at 0xF0070FD: pipe (pipe.c:29) ==25748== by 0x1972D07D: ??? ==25748== by 0x13CD04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25748== by 0xEC54418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25748== by 0xEBEDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25748== by 0xD8E4D38: PetscInitialize (pinit.c:924) ==25748== by 0xD753E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25748== by 0xD753EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25748== by 0x162DFB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25748== by 0x15D597: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25748== by 0x1604CA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25748== by 0x16036A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25748== by 0x160A01: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25748== by 0x15B575: main (TestCellCycleModelOdeSolver.cpp:19) ==25748== ==25748== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25748== at 0xF00BA9C: __open_nocancel (open64_nocancel.c:39) ==25748== by 0xEF8FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25748== by 0xD78B822: ??? ==25748== by 0xD78B96F: ??? ==25748== by 0x13D756DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25748== by 0x13D75938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25748== by 0x13D2B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25748== by 0x13CD02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25748== by 0xEC54418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25748== by 0xEBEDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25748== by 0xD8E4D38: PetscInitialize (pinit.c:924) ==25748== by 0xD753E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25748== by 0xD753EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25748== by 0x162DFB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25748== by 0x15D597: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25748== by 0x1604CA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25748== by 0x16036A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25748== by 0x160A01: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25748== by 0x15B575: main (TestCellCycleModelOdeSolver.cpp:19) ==25748== ==25748== Open file descriptor 145: ==25748== ==25748== ==25748== Open file descriptor 142: ==25748== ==25748== ==25748== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellCycleModelOdeSolver_valgrind.txt ==25748== ==25748== ==25748== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25748== ==25748== ==25748== ==25748== HEAP SUMMARY: ==25748== in use at exit: 15,444 bytes in 51 blocks ==25748== total heap usage: 530,951 allocs, 530,900 frees, 12,542,563 bytes allocated ==25748== ==25748== LEAK SUMMARY: ==25748== definitely lost: 0 bytes in 0 blocks ==25748== indirectly lost: 0 bytes in 0 blocks ==25748== possibly lost: 0 bytes in 0 blocks ==25748== still reachable: 56 bytes in 3 blocks ==25748== suppressed: 15,388 bytes in 48 blocks ==25748== Reachable blocks (those to which a pointer was found) are not shown. ==25748== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25748== ==25748== For lists of detected and suppressed errors, rerun with: -s ==25748== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)