==41420== Memcheck, a memory error detector ==41420== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41420== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41420== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/lung/test/TestVentilationProblem -malloc_debug -malloc_dump -memory_info ==41420== Parent PID: 24384 ==41420== ==41420== ==41420== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41420== Open file descriptor 12: ==41420== at 0x6E760FD: pipe (pipe.c:29) ==41420== by 0x107C307D: ??? ==41420== by 0x9ABB4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41420== by 0x7073418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41420== by 0x700CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41420== by 0x71B8D38: PetscInitialize (pinit.c:924) ==41420== by 0x668FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41420== by 0x668FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41420== by 0x11769E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41420== by 0x1128D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41420== by 0x115638: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41420== by 0x1154D8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41420== by 0x115B6F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41420== by 0x110B55: main (TestVentilationProblem.cpp:19) ==41420== ==41420== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41420== at 0x6E7AA9C: __open_nocancel (open64_nocancel.c:39) ==41420== by 0x6DFEBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41420== by 0x66C7822: ??? ==41420== by 0x66C796F: ??? ==41420== by 0x9B606DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41420== by 0x9B60938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41420== by 0x9B16922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41420== by 0x9ABB2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41420== by 0x7073418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41420== by 0x700CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41420== by 0x71B8D38: PetscInitialize (pinit.c:924) ==41420== by 0x668FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41420== by 0x668FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41420== by 0x11769E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41420== by 0x1128D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41420== by 0x115638: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41420== by 0x1154D8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41420== by 0x115B6F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41420== by 0x110B55: main (TestVentilationProblem.cpp:19) ==41420== ==41420== Open file descriptor 145: ==41420== ==41420== ==41420== Open file descriptor 142: ==41420== ==41420== ==41420== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVentilationProblem_valgrind.txt ==41420== ==41420== ==41420== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41420== ==41420== ==41420== ==41420== HEAP SUMMARY: ==41420== in use at exit: 15,339 bytes in 46 blocks ==41420== total heap usage: 5,790,214 allocs, 5,790,168 frees, 493,744,771 bytes allocated ==41420== ==41420== LEAK SUMMARY: ==41420== definitely lost: 0 bytes in 0 blocks ==41420== indirectly lost: 0 bytes in 0 blocks ==41420== possibly lost: 0 bytes in 0 blocks ==41420== still reachable: 24 bytes in 2 blocks ==41420== suppressed: 15,315 bytes in 44 blocks ==41420== Reachable blocks (those to which a pointer was found) are not shown. ==41420== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41420== ==41420== For lists of detected and suppressed errors, rerun with: -s ==41420== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 29 from 29)