==25318== Memcheck, a memory error detector ==25318== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25318== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25318== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/ode/test/TestAbstractOdeSystem -malloc_debug -malloc_dump -memory_info ==25318== Parent PID: 24431 ==25318== ==25318== ==25318== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25318== Open file descriptor 12: ==25318== at 0x64180FD: pipe (pipe.c:29) ==25318== by 0xB1F707D: ??? ==25318== by 0x8CEF4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25318== by 0x6067418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25318== by 0x6000D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25318== by 0x4CF7D38: PetscInitialize (pinit.c:924) ==25318== by 0x4B4B80D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25318== by 0x4B4B85B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25318== by 0x138AEF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25318== by 0x1325E1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25318== by 0x135746: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25318== by 0x1355E6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25318== by 0x135C7D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25318== by 0x12FE55: main (TestAbstractOdeSystem.cpp:19) ==25318== ==25318== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25318== at 0x641CA9C: __open_nocancel (open64_nocancel.c:39) ==25318== by 0x63A0BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25318== by 0x4B82822: ??? ==25318== by 0x4B8296F: ??? ==25318== by 0x8D946DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25318== by 0x8D94938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25318== by 0x8D4A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25318== by 0x8CEF2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25318== by 0x6067418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25318== by 0x6000D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25318== by 0x4CF7D38: PetscInitialize (pinit.c:924) ==25318== by 0x4B4B80D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25318== by 0x4B4B85B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25318== by 0x138AEF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25318== by 0x1325E1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25318== by 0x135746: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25318== by 0x1355E6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25318== by 0x135C7D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25318== by 0x12FE55: main (TestAbstractOdeSystem.cpp:19) ==25318== ==25318== Open file descriptor 145: ==25318== ==25318== ==25318== Open file descriptor 142: ==25318== ==25318== ==25318== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestAbstractOdeSystem_valgrind.txt ==25318== ==25318== ==25318== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25318== ==25318== ==25318== ==25318== HEAP SUMMARY: ==25318== in use at exit: 15,012 bytes in 50 blocks ==25318== total heap usage: 29,545 allocs, 29,495 frees, 6,117,167 bytes allocated ==25318== ==25318== LEAK SUMMARY: ==25318== definitely lost: 0 bytes in 0 blocks ==25318== indirectly lost: 0 bytes in 0 blocks ==25318== possibly lost: 0 bytes in 0 blocks ==25318== still reachable: 24 bytes in 2 blocks ==25318== suppressed: 14,988 bytes in 48 blocks ==25318== Reachable blocks (those to which a pointer was found) are not shown. ==25318== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25318== ==25318== For lists of detected and suppressed errors, rerun with: -s ==25318== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)