==40599== Memcheck, a memory error detector ==40599== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40599== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40599== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCellForCrypt -malloc_debug -malloc_dump -memory_info ==40599== Parent PID: 24431 ==40599== ==40599== ==40599== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40599== Open file descriptor 12: ==40599== at 0xF4D50FD: pipe (pipe.c:29) ==40599== by 0x1B3F507D: ??? ==40599== by 0x1442B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40599== by 0x11B5F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40599== by 0x11AF8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40599== by 0x11CA4D38: PetscInitialize (pinit.c:924) ==40599== by 0xEDD680D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40599== by 0xEDD685B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40599== by 0x11EA7E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40599== by 0x11A173: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40599== by 0x11C6C4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40599== by 0x11C5C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40599== by 0x11CBD3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40599== by 0x118975: main (TestCellForCrypt.cpp:18) ==40599== ==40599== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40599== at 0xF4D9A9C: __open_nocancel (open64_nocancel.c:39) ==40599== by 0xF45DBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40599== by 0xEE0D822: ??? ==40599== by 0xEE0D96F: ??? ==40599== by 0x144D06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40599== by 0x144D0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40599== by 0x14486922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40599== by 0x1442B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40599== by 0x11B5F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40599== by 0x11AF8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40599== by 0x11CA4D38: PetscInitialize (pinit.c:924) ==40599== by 0xEDD680D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40599== by 0xEDD685B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40599== by 0x11EA7E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40599== by 0x11A173: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40599== by 0x11C6C4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40599== by 0x11C5C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40599== by 0x11CBD3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40599== by 0x118975: main (TestCellForCrypt.cpp:18) ==40599== ==40599== Open file descriptor 145: ==40599== ==40599== ==40599== Open file descriptor 142: ==40599== ==40599== ==40599== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellForCrypt_valgrind.txt ==40599== ==40599== ==40599== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40599== ==40599== ==40599== ==40599== HEAP SUMMARY: ==40599== in use at exit: 15,588 bytes in 52 blocks ==40599== total heap usage: 39,321 allocs, 39,269 frees, 6,982,070 bytes allocated ==40599== ==40599== LEAK SUMMARY: ==40599== definitely lost: 0 bytes in 0 blocks ==40599== indirectly lost: 0 bytes in 0 blocks ==40599== possibly lost: 0 bytes in 0 blocks ==40599== still reachable: 184 bytes in 4 blocks ==40599== suppressed: 15,404 bytes in 48 blocks ==40599== Reachable blocks (those to which a pointer was found) are not shown. ==40599== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40599== ==40599== For lists of detected and suppressed errors, rerun with: -s ==40599== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)