==40712== Memcheck, a memory error detector ==40712== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40712== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40712== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestMirams2010WntOdeSystem -malloc_debug -malloc_dump -memory_info ==40712== Parent PID: 24431 ==40712== ==40712== ==40712== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40712== Open file descriptor 12: ==40712== at 0xF4140FD: pipe (pipe.c:29) ==40712== by 0x1B3F207D: ??? ==40712== by 0x144744CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40712== by 0x11B5F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40712== by 0x11AF8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40712== by 0x11CA4D38: PetscInitialize (pinit.c:924) ==40712== by 0xF07D80D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40712== by 0xF07D85B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40712== by 0x1261EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40712== by 0x12141B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40712== by 0x123B60: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40712== by 0x123A5C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40712== by 0x12406F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40712== by 0x11F065: main (TestMirams2010WntOdeSystem.cpp:18) ==40712== ==40712== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40712== at 0xF418A9C: __open_nocancel (open64_nocancel.c:39) ==40712== by 0xF39CBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40712== by 0x611C822: ??? ==40712== by 0x611C96F: ??? ==40712== by 0x145196DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40712== by 0x14519938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40712== by 0x144CF922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40712== by 0x144742DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40712== by 0x11B5F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40712== by 0x11AF8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40712== by 0x11CA4D38: PetscInitialize (pinit.c:924) ==40712== by 0xF07D80D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40712== by 0xF07D85B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40712== by 0x1261EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40712== by 0x12141B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40712== by 0x123B60: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40712== by 0x123A5C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40712== by 0x12406F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40712== by 0x11F065: main (TestMirams2010WntOdeSystem.cpp:18) ==40712== ==40712== Open file descriptor 145: ==40712== ==40712== ==40712== Open file descriptor 142: ==40712== ==40712== ==40712== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMirams2010WntOdeSystem_valgrind.txt ==40712== ==40712== ==40712== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40712== ==40712== ==40712== ==40712== HEAP SUMMARY: ==40712== in use at exit: 15,460 bytes in 51 blocks ==40712== total heap usage: 50,381 allocs, 50,330 frees, 8,155,087 bytes allocated ==40712== ==40712== LEAK SUMMARY: ==40712== definitely lost: 0 bytes in 0 blocks ==40712== indirectly lost: 0 bytes in 0 blocks ==40712== possibly lost: 0 bytes in 0 blocks ==40712== still reachable: 56 bytes in 3 blocks ==40712== suppressed: 15,404 bytes in 48 blocks ==40712== Reachable blocks (those to which a pointer was found) are not shown. ==40712== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40712== ==40712== For lists of detected and suppressed errors, rerun with: -s ==40712== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)