==26399== Memcheck, a memory error detector ==26399== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26399== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26399== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMutableVertexMeshOperationsWithPopulationSrn -malloc_debug -malloc_dump -memory_info ==26399== Parent PID: 24431 ==26399== ==26399== ==26399== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26399== Open file descriptor 12: ==26399== at 0x10D330FD: pipe (pipe.c:29) ==26399== by 0x1973207D: ??? ==26399== by 0x14CE34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26399== by 0x10980418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26399== by 0x10919D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26399== by 0xF610D38: PetscInitialize (pinit.c:924) ==26399== by 0xF17D80D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26399== by 0xF17D85B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26399== by 0x12FA43: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26399== by 0x12AAD3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26399== by 0x12D2E4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26399== by 0x12D1E0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26399== by 0x12D7F3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26399== by 0x1292D5: main (TestMutableVertexMeshOperationsWithPopulationSrn.cpp:18) ==26399== ==26399== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26399== at 0x10D37A9C: __open_nocancel (open64_nocancel.c:39) ==26399== by 0x10CBBBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26399== by 0xF1B4822: ??? ==26399== by 0xF1B496F: ??? ==26399== by 0x14D8A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26399== by 0x14D8A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26399== by 0x14D40922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26399== by 0x14CE32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26399== by 0x10980418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26399== by 0x10919D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26399== by 0xF610D38: PetscInitialize (pinit.c:924) ==26399== by 0xF17D80D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26399== by 0xF17D85B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26399== by 0x12FA43: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26399== by 0x12AAD3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26399== by 0x12D2E4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26399== by 0x12D1E0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26399== by 0x12D7F3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26399== by 0x1292D5: main (TestMutableVertexMeshOperationsWithPopulationSrn.cpp:18) ==26399== ==26399== Open file descriptor 145: ==26399== ==26399== ==26399== Open file descriptor 142: ==26399== ==26399== ==26399== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMutableVertexMeshOperationsWithPopulationSrn_valgrind.txt ==26399== ==26399== ==26399== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26399== ==26399== ==26399== ==26399== HEAP SUMMARY: ==26399== in use at exit: 15,444 bytes in 51 blocks ==26399== total heap usage: 44,357 allocs, 44,306 frees, 7,092,623 bytes allocated ==26399== ==26399== LEAK SUMMARY: ==26399== definitely lost: 0 bytes in 0 blocks ==26399== indirectly lost: 0 bytes in 0 blocks ==26399== possibly lost: 0 bytes in 0 blocks ==26399== still reachable: 56 bytes in 3 blocks ==26399== suppressed: 15,388 bytes in 48 blocks ==26399== Reachable blocks (those to which a pointer was found) are not shown. ==26399== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26399== ==26399== For lists of detected and suppressed errors, rerun with: -s ==26399== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)