==27182== Memcheck, a memory error detector ==27182== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==27182== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==27182== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d -malloc_debug -malloc_dump -memory_info ==27182== Parent PID: 24431 ==27182== ==27182== ==27182== FILE DESCRIPTORS: 9 open (3 std) at exit. ==27182== Open file descriptor 12: ==27182== at 0xF9630FD: pipe (pipe.c:29) ==27182== by 0x1973407D: ??? ==27182== by 0x12B784CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==27182== by 0x1025D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27182== by 0x101F6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27182== by 0x103E4D38: PetscInitialize (pinit.c:924) ==27182== by 0xF17D80D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==27182== by 0xF17D85B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==27182== by 0x13385A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==27182== by 0x12E813: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==27182== by 0x130FCC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==27182== by 0x130EC7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==27182== by 0x1314DB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==27182== by 0x12D015: main (TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d.cpp:18) ==27182== ==27182== Open file descriptor 8: /dev/shm/open_mpi.0000 ==27182== at 0xF967A9C: __open_nocancel (open64_nocancel.c:39) ==27182== by 0xF8EBBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==27182== by 0xF1B4822: ??? ==27182== by 0xF1B496F: ??? ==27182== by 0x12C1D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27182== by 0x12C1D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27182== by 0x12BD3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27182== by 0x12B782DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==27182== by 0x1025D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27182== by 0x101F6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27182== by 0x103E4D38: PetscInitialize (pinit.c:924) ==27182== by 0xF17D80D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==27182== by 0xF17D85B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==27182== by 0x13385A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==27182== by 0x12E813: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==27182== by 0x130FCC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==27182== by 0x130EC7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==27182== by 0x1314DB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==27182== by 0x12D015: main (TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d.cpp:18) ==27182== ==27182== Open file descriptor 145: ==27182== ==27182== ==27182== Open file descriptor 142: ==27182== ==27182== ==27182== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d_valgrind.txt ==27182== ==27182== ==27182== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==27182== ==27182== ==27182== ==27182== HEAP SUMMARY: ==27182== in use at exit: 15,371 bytes in 47 blocks ==27182== total heap usage: 7,110,537 allocs, 7,110,490 frees, 7,707,737,005 bytes allocated ==27182== ==27182== LEAK SUMMARY: ==27182== definitely lost: 0 bytes in 0 blocks ==27182== indirectly lost: 0 bytes in 0 blocks ==27182== possibly lost: 0 bytes in 0 blocks ==27182== still reachable: 56 bytes in 3 blocks ==27182== suppressed: 15,315 bytes in 44 blocks ==27182== Reachable blocks (those to which a pointer was found) are not shown. ==27182== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==27182== ==27182== For lists of detected and suppressed errors, rerun with: -s ==27182== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 29 from 29)