==40372== Memcheck, a memory error detector ==40372== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40372== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40372== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningImmersedBoundarySimulationsTutorial -malloc_debug -malloc_dump -memory_info ==40372== Parent PID: 24431 ==40372== ==40372== ==40372== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40372== Open file descriptor 12: ==40372== at 0x10D330FD: pipe (pipe.c:29) ==40372== by 0x1973207D: ??? ==40372== by 0x14CE34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40372== by 0x10980418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40372== by 0x10919D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40372== by 0xF610D38: PetscInitialize (pinit.c:924) ==40372== by 0xF17D80D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40372== by 0xF17D85B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40372== by 0x120CF3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40372== by 0x11C533: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40372== by 0x11E8AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40372== by 0x11E7A7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40372== by 0x11EDBB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40372== by 0x11AD35: main (TestRunningImmersedBoundarySimulationsTutorial.cpp:18) ==40372== ==40372== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40372== at 0x10D37A9C: __open_nocancel (open64_nocancel.c:39) ==40372== by 0x10CBBBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40372== by 0xF1B4822: ??? ==40372== by 0xF1B496F: ??? ==40372== by 0x14D8A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40372== by 0x14D8A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40372== by 0x14D40922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40372== by 0x14CE32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40372== by 0x10980418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40372== by 0x10919D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40372== by 0xF610D38: PetscInitialize (pinit.c:924) ==40372== by 0xF17D80D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40372== by 0xF17D85B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40372== by 0x120CF3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40372== by 0x11C533: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40372== by 0x11E8AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40372== by 0x11E7A7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40372== by 0x11EDBB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40372== by 0x11AD35: main (TestRunningImmersedBoundarySimulationsTutorial.cpp:18) ==40372== ==40372== Open file descriptor 145: ==40372== ==40372== ==40372== Open file descriptor 142: ==40372== ==40372== ==40372== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningImmersedBoundarySimulationsTutorial_valgrind.txt ==40372== ==40372== ==40372== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40372== ==40372== ==40372== ==40372== HEAP SUMMARY: ==40372== in use at exit: 15,371 bytes in 47 blocks ==40372== total heap usage: 638,529 allocs, 638,482 frees, 180,643,611 bytes allocated ==40372== ==40372== LEAK SUMMARY: ==40372== definitely lost: 0 bytes in 0 blocks ==40372== indirectly lost: 0 bytes in 0 blocks ==40372== possibly lost: 0 bytes in 0 blocks ==40372== still reachable: 56 bytes in 3 blocks ==40372== suppressed: 15,315 bytes in 44 blocks ==40372== Reachable blocks (those to which a pointer was found) are not shown. ==40372== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40372== ==40372== For lists of detected and suppressed errors, rerun with: -s ==40372== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 29 from 29)