==40682== Memcheck, a memory error detector ==40682== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40682== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40682== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVertexCryptBoundaryForce -malloc_debug -malloc_dump -memory_info ==40682== Parent PID: 24431 ==40682== ==40682== ==40682== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40682== Open file descriptor 12: ==40682== at 0x1113C0FD: pipe (pipe.c:29) ==40682== by 0x1B3F407D: ??? ==40682== by 0x144324CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40682== by 0x11B5F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40682== by 0x11AF8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40682== by 0x11CA4D38: PetscInitialize (pinit.c:924) ==40682== by 0x10A3D80D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40682== by 0x10A3D85B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40682== by 0x126BFE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40682== by 0x11FE4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40682== by 0x1228FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40682== by 0x12279C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40682== by 0x122E33: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40682== by 0x11E275: main (TestVertexCryptBoundaryForce.cpp:19) ==40682== ==40682== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40682== at 0x11140A9C: __open_nocancel (open64_nocancel.c:39) ==40682== by 0x110C4BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40682== by 0x10A74822: ??? ==40682== by 0x10A7496F: ??? ==40682== by 0x144D76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40682== by 0x144D7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40682== by 0x1448D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40682== by 0x144322DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40682== by 0x11B5F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40682== by 0x11AF8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40682== by 0x11CA4D38: PetscInitialize (pinit.c:924) ==40682== by 0x10A3D80D: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40682== by 0x10A3D85B: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40682== by 0x126BFE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40682== by 0x11FE4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40682== by 0x1228FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40682== by 0x12279C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40682== by 0x122E33: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40682== by 0x11E275: main (TestVertexCryptBoundaryForce.cpp:19) ==40682== ==40682== Open file descriptor 145: ==40682== ==40682== ==40682== Open file descriptor 142: ==40682== ==40682== ==40682== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVertexCryptBoundaryForce_valgrind.txt ==40682== ==40682== ==40682== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40682== ==40682== ==40682== ==40682== HEAP SUMMARY: ==40682== in use at exit: 15,460 bytes in 51 blocks ==40682== total heap usage: 40,063 allocs, 40,012 frees, 6,963,254 bytes allocated ==40682== ==40682== LEAK SUMMARY: ==40682== definitely lost: 0 bytes in 0 blocks ==40682== indirectly lost: 0 bytes in 0 blocks ==40682== possibly lost: 0 bytes in 0 blocks ==40682== still reachable: 56 bytes in 3 blocks ==40682== suppressed: 15,404 bytes in 48 blocks ==40682== Reachable blocks (those to which a pointer was found) are not shown. ==40682== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40682== ==40682== For lists of detected and suppressed errors, rerun with: -s ==40682== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)