==25643== Memcheck, a memory error detector ==25643== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25643== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25643== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellSrn -malloc_debug -malloc_dump -memory_info ==25643== Parent PID: 24378 ==25643== ==25643== ==25643== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25643== Open file descriptor 12: ==25643== at 0xED820FD: pipe (pipe.c:29) ==25643== by 0x1972F07D: ??? ==25643== by 0x13C804CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25643== by 0xE9D1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25643== by 0xE96AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25643== by 0xD63ED38: PetscInitialize (pinit.c:924) ==25643== by 0xD510E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25643== by 0xD510EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25643== by 0x119821: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25643== by 0x115133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25643== by 0x117438: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25643== by 0x117333: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25643== by 0x117947: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25643== by 0x113935: main (TestCellSrn.cpp:18) ==25643== ==25643== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25643== at 0xED86A9C: __open_nocancel (open64_nocancel.c:39) ==25643== by 0xED0ABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25643== by 0xE8C8822: ??? ==25643== by 0xE8C896F: ??? ==25643== by 0x13D256DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25643== by 0x13D25938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25643== by 0x13CDB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25643== by 0x13C802DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25643== by 0xE9D1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25643== by 0xE96AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25643== by 0xD63ED38: PetscInitialize (pinit.c:924) ==25643== by 0xD510E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25643== by 0xD510EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25643== by 0x119821: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25643== by 0x115133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25643== by 0x117438: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25643== by 0x117333: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25643== by 0x117947: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25643== by 0x113935: main (TestCellSrn.cpp:18) ==25643== ==25643== Open file descriptor 145: ==25643== ==25643== ==25643== Open file descriptor 142: ==25643== ==25643== ==25643== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellSrn_valgrind.txt ==25643== ==25643== ==25643== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25643== ==25643== ==25643== ==25643== HEAP SUMMARY: ==25643== in use at exit: 15,508 bytes in 52 blocks ==25643== total heap usage: 46,900 allocs, 46,848 frees, 7,172,211 bytes allocated ==25643== ==25643== LEAK SUMMARY: ==25643== definitely lost: 0 bytes in 0 blocks ==25643== indirectly lost: 0 bytes in 0 blocks ==25643== possibly lost: 0 bytes in 0 blocks ==25643== still reachable: 120 bytes in 4 blocks ==25643== suppressed: 15,388 bytes in 48 blocks ==25643== Reachable blocks (those to which a pointer was found) are not shown. ==25643== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25643== ==25643== For lists of detected and suppressed errors, rerun with: -s ==25643== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)