==25636== Memcheck, a memory error detector ==25636== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25636== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25636== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCell -malloc_debug -malloc_dump -memory_info ==25636== Parent PID: 24378 ==25636== ==25636== ==25636== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25636== Open file descriptor 12: ==25636== at 0xED820FD: pipe (pipe.c:29) ==25636== by 0x1972F07D: ??? ==25636== by 0x13C804CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25636== by 0xE9D1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25636== by 0xE96AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25636== by 0xD63ED38: PetscInitialize (pinit.c:924) ==25636== by 0xD510E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25636== by 0xD510EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25636== by 0x1291DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25636== by 0x123ECD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25636== by 0x126DAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25636== by 0x126C4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25636== by 0x1272E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25636== by 0x1222F5: main (TestCell.cpp:19) ==25636== ==25636== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25636== at 0xED86A9C: __open_nocancel (open64_nocancel.c:39) ==25636== by 0xED0ABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25636== by 0xE8C8822: ??? ==25636== by 0xE8C896F: ??? ==25636== by 0x13D256DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25636== by 0x13D25938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25636== by 0x13CDB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25636== by 0x13C802DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25636== by 0xE9D1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25636== by 0xE96AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25636== by 0xD63ED38: PetscInitialize (pinit.c:924) ==25636== by 0xD510E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25636== by 0xD510EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25636== by 0x1291DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25636== by 0x123ECD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25636== by 0x126DAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25636== by 0x126C4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25636== by 0x1272E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25636== by 0x1222F5: main (TestCell.cpp:19) ==25636== ==25636== Open file descriptor 145: ==25636== ==25636== ==25636== Open file descriptor 142: ==25636== ==25636== ==25636== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCell_valgrind.txt ==25636== ==25636== ==25636== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25636== ==25636== ==25636== ==25636== HEAP SUMMARY: ==25636== in use at exit: 15,499 bytes in 48 blocks ==25636== total heap usage: 5,167,069 allocs, 5,167,021 frees, 486,973,178 bytes allocated ==25636== ==25636== LEAK SUMMARY: ==25636== definitely lost: 0 bytes in 0 blocks ==25636== indirectly lost: 0 bytes in 0 blocks ==25636== possibly lost: 0 bytes in 0 blocks ==25636== still reachable: 184 bytes in 4 blocks ==25636== suppressed: 15,315 bytes in 44 blocks ==25636== Reachable blocks (those to which a pointer was found) are not shown. ==25636== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25636== ==25636== For lists of detected and suppressed errors, rerun with: -s ==25636== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 29 from 29)