==42013== Memcheck, a memory error detector ==42013== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==42013== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==42013== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem -malloc_debug -malloc_dump -memory_info ==42013== Parent PID: 24378 ==42013== ==42013== ==42013== FILE DESCRIPTORS: 9 open (3 std) at exit. ==42013== Open file descriptor 12: ==42013== at 0x85990FD: pipe (pipe.c:29) ==42013== by 0x1435F07D: ??? ==42013== by 0xC8D74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42013== by 0x8967418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42013== by 0x8900D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42013== by 0x8E42D38: PetscInitialize (pinit.c:924) ==42013== by 0x81C2E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42013== by 0x81C2EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42013== by 0x1151B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42013== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42013== by 0x112FCA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42013== by 0x112EC5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42013== by 0x1134D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42013== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==42013== ==42013== Open file descriptor 8: /dev/shm/open_mpi.0000 ==42013== at 0x859DA9C: __open_nocancel (open64_nocancel.c:39) ==42013== by 0x8521BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==42013== by 0x81FA822: ??? ==42013== by 0x81FA96F: ??? ==42013== by 0xC97C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42013== by 0xC97C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42013== by 0xC932922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42013== by 0xC8D72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42013== by 0x8967418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42013== by 0x8900D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42013== by 0x8E42D38: PetscInitialize (pinit.c:924) ==42013== by 0x81C2E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42013== by 0x81C2EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42013== by 0x1151B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42013== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42013== by 0x112FCA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42013== by 0x112EC5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42013== by 0x1134D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42013== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==42013== ==42013== Open file descriptor 145: ==42013== ==42013== ==42013== Open file descriptor 142: ==42013== ==42013== ==42013== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem_valgrind.txt ==42013== ==42013== ==42013== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==42013== ==42013== ==42013== ==42013== HEAP SUMMARY: ==42013== in use at exit: 15,428 bytes in 50 blocks ==42013== total heap usage: 32,582 allocs, 32,532 frees, 6,319,412 bytes allocated ==42013== ==42013== LEAK SUMMARY: ==42013== definitely lost: 0 bytes in 0 blocks ==42013== indirectly lost: 0 bytes in 0 blocks ==42013== possibly lost: 0 bytes in 0 blocks ==42013== still reachable: 24 bytes in 2 blocks ==42013== suppressed: 15,404 bytes in 48 blocks ==42013== Reachable blocks (those to which a pointer was found) are not shown. ==42013== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==42013== ==42013== For lists of detected and suppressed errors, rerun with: -s ==42013== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)