==26344== Memcheck, a memory error detector ==26344== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26344== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26344== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMeshBasedCellPopulationWithGhostNodes -malloc_debug -malloc_dump -memory_info ==26344== Parent PID: 24378 ==26344== ==26344== ==26344== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26344== Open file descriptor 12: ==26344== at 0x10E170FD: pipe (pipe.c:29) ==26344== by 0x1972E07D: ??? ==26344== by 0x14CE14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26344== by 0x1097D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26344== by 0x10916D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26344== by 0xF60DD38: PetscInitialize (pinit.c:924) ==26344== by 0xF179E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26344== by 0xF179EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26344== by 0x159CA9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26344== by 0x1521AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26344== by 0x15565A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26344== by 0x1554FA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26344== by 0x155B91: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26344== by 0x1505D5: main (TestMeshBasedCellPopulationWithGhostNodes.cpp:19) ==26344== ==26344== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26344== at 0x10E1BA9C: __open_nocancel (open64_nocancel.c:39) ==26344== by 0x10D9FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26344== by 0xF1B1822: ??? ==26344== by 0xF1B196F: ??? ==26344== by 0x14D866DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26344== by 0x14D86938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26344== by 0x14D3C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26344== by 0x14CE12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26344== by 0x1097D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26344== by 0x10916D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26344== by 0xF60DD38: PetscInitialize (pinit.c:924) ==26344== by 0xF179E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26344== by 0xF179EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26344== by 0x159CA9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26344== by 0x1521AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26344== by 0x15565A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26344== by 0x1554FA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26344== by 0x155B91: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26344== by 0x1505D5: main (TestMeshBasedCellPopulationWithGhostNodes.cpp:19) ==26344== ==26344== Open file descriptor 145: ==26344== ==26344== ==26344== Open file descriptor 142: ==26344== ==26344== ==26344== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMeshBasedCellPopulationWithGhostNodes_valgrind.txt ==26344== ==26344== ==26344== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26344== ==26344== ==26344== ==26344== HEAP SUMMARY: ==26344== in use at exit: 15,444 bytes in 51 blocks ==26344== total heap usage: 216,446 allocs, 216,395 frees, 31,977,385 bytes allocated ==26344== ==26344== LEAK SUMMARY: ==26344== definitely lost: 0 bytes in 0 blocks ==26344== indirectly lost: 0 bytes in 0 blocks ==26344== possibly lost: 0 bytes in 0 blocks ==26344== still reachable: 56 bytes in 3 blocks ==26344== suppressed: 15,388 bytes in 48 blocks ==26344== Reachable blocks (those to which a pointer was found) are not shown. ==26344== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26344== ==26344== For lists of detected and suppressed errors, rerun with: -s ==26344== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)