==26369== Memcheck, a memory error detector ==26369== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26369== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26369== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==26369== Parent PID: 24378 ==26369== ==26369== ==26369== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26369== Open file descriptor 12: ==26369== at 0xF94C0FD: pipe (pipe.c:29) ==26369== by 0x1973007D: ??? ==26369== by 0x12B784CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26369== by 0x101B5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26369== by 0x1014ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26369== by 0x102FAD38: PetscInitialize (pinit.c:924) ==26369== by 0xF208E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26369== by 0xF208EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26369== by 0x2E35E2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26369== by 0x2DA0D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26369== by 0x2DE936: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26369== by 0x2DE7D6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26369== by 0x2DEE6D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26369== by 0x2D84F5: main (TestNodeBasedCellPopulation.cpp:19) ==26369== ==26369== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26369== at 0xF950A9C: __open_nocancel (open64_nocancel.c:39) ==26369== by 0xF8D4BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26369== by 0xF240822: ??? ==26369== by 0xF24096F: ??? ==26369== by 0x12C1D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26369== by 0x12C1D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26369== by 0x12BD3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26369== by 0x12B782DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26369== by 0x101B5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26369== by 0x1014ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26369== by 0x102FAD38: PetscInitialize (pinit.c:924) ==26369== by 0xF208E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26369== by 0xF208EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26369== by 0x2E35E2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26369== by 0x2DA0D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26369== by 0x2DE936: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26369== by 0x2DE7D6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26369== by 0x2DEE6D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26369== by 0x2D84F5: main (TestNodeBasedCellPopulation.cpp:19) ==26369== ==26369== Open file descriptor 145: ==26369== ==26369== ==26369== Open file descriptor 142: ==26369== ==26369== ==26369== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulation_valgrind.txt ==26369== ==26369== ==26369== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26369== ==26369== ==26369== ==26369== HEAP SUMMARY: ==26369== in use at exit: 15,371 bytes in 47 blocks ==26369== total heap usage: 30,274,248 allocs, 30,274,201 frees, 1,832,548,984 bytes allocated ==26369== ==26369== LEAK SUMMARY: ==26369== definitely lost: 0 bytes in 0 blocks ==26369== indirectly lost: 0 bytes in 0 blocks ==26369== possibly lost: 0 bytes in 0 blocks ==26369== still reachable: 56 bytes in 3 blocks ==26369== suppressed: 15,315 bytes in 44 blocks ==26369== Reachable blocks (those to which a pointer was found) are not shown. ==26369== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26369== ==26369== For lists of detected and suppressed errors, rerun with: -s ==26369== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 29 from 29)