==41838== Memcheck, a memory error detector ==41838== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41838== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41838== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestGeneralizedRushLarsen -malloc_debug -malloc_dump -memory_info ==41838== Parent PID: 24355 ==41838== ==41838== ==41838== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41838== Open file descriptor 12: ==41838== at 0x87DA0FD: pipe (pipe.c:29) ==41838== by 0x1435F07D: ??? ==41838== by 0xC8D74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41838== by 0x8BA8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41838== by 0x8B41D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41838== by 0x9083D38: PetscInitialize (pinit.c:924) ==41838== by 0x8405E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41838== by 0x8405EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41838== by 0x11C6A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41838== by 0x1178AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41838== by 0x11A2AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41838== by 0x11A14C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41838== by 0x11A7E3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41838== by 0x115CD5: main (TestGeneralizedRushLarsen.cpp:19) ==41838== ==41838== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41838== at 0x87DEA9C: __open_nocancel (open64_nocancel.c:39) ==41838== by 0x8762BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41838== by 0x843D822: ??? ==41838== by 0x843D96F: ??? ==41838== by 0xC97C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41838== by 0xC97C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41838== by 0xC932922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41838== by 0xC8D72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41838== by 0x8BA8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41838== by 0x8B41D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41838== by 0x9083D38: PetscInitialize (pinit.c:924) ==41838== by 0x8405E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41838== by 0x8405EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41838== by 0x11C6A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41838== by 0x1178AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41838== by 0x11A2AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41838== by 0x11A14C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41838== by 0x11A7E3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41838== by 0x115CD5: main (TestGeneralizedRushLarsen.cpp:19) ==41838== ==41838== Open file descriptor 145: ==41838== ==41838== ==41838== Open file descriptor 142: ==41838== ==41838== ==41838== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestGeneralizedRushLarsen_valgrind.txt ==41838== ==41838== ==41838== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41838== ==41838== ==41838== ==41838== HEAP SUMMARY: ==41838== in use at exit: 18,960 bytes in 54 blocks ==41838== total heap usage: 3,037,797 allocs, 3,037,743 frees, 280,504,122 bytes allocated ==41838== ==41838== LEAK SUMMARY: ==41838== definitely lost: 0 bytes in 0 blocks ==41838== indirectly lost: 0 bytes in 0 blocks ==41838== possibly lost: 0 bytes in 0 blocks ==41838== still reachable: 3,629 bytes in 10 blocks ==41838== suppressed: 15,331 bytes in 44 blocks ==41838== Reachable blocks (those to which a pointer was found) are not shown. ==41838== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41838== ==41838== For lists of detected and suppressed errors, rerun with: -s ==41838== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 29 from 29)