==40274== Memcheck, a memory error detector ==40274== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40274== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40274== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningImmersedBoundarySimulationsTutorial -malloc_debug -malloc_dump -memory_info ==40274== Parent PID: 24355 ==40274== ==40274== ==40274== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40274== Open file descriptor 12: ==40274== at 0x10D370FD: pipe (pipe.c:29) ==40274== by 0x1973507D: ??? ==40274== by 0x14CEC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40274== by 0x10984418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40274== by 0x1091DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40274== by 0xF614D38: PetscInitialize (pinit.c:924) ==40274== by 0xF180E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40274== by 0xF180EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40274== by 0x120CF3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40274== by 0x11C533: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40274== by 0x11E8AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40274== by 0x11E7A7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40274== by 0x11EDBB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40274== by 0x11AD35: main (TestRunningImmersedBoundarySimulationsTutorial.cpp:18) ==40274== ==40274== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40274== at 0x10D3BA9C: __open_nocancel (open64_nocancel.c:39) ==40274== by 0x10CBFBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40274== by 0xF1B8822: ??? ==40274== by 0xF1B896F: ??? ==40274== by 0x14D916DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40274== by 0x14D91938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40274== by 0x14D47922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40274== by 0x14CEC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40274== by 0x10984418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40274== by 0x1091DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40274== by 0xF614D38: PetscInitialize (pinit.c:924) ==40274== by 0xF180E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40274== by 0xF180EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40274== by 0x120CF3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40274== by 0x11C533: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40274== by 0x11E8AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40274== by 0x11E7A7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40274== by 0x11EDBB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40274== by 0x11AD35: main (TestRunningImmersedBoundarySimulationsTutorial.cpp:18) ==40274== ==40274== Open file descriptor 145: ==40274== ==40274== ==40274== Open file descriptor 142: ==40274== ==40274== ==40274== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningImmersedBoundarySimulationsTutorial_valgrind.txt ==40274== ==40274== ==40274== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40274== ==40274== ==40274== ==40274== HEAP SUMMARY: ==40274== in use at exit: 15,371 bytes in 47 blocks ==40274== total heap usage: 638,526 allocs, 638,479 frees, 180,643,590 bytes allocated ==40274== ==40274== LEAK SUMMARY: ==40274== definitely lost: 0 bytes in 0 blocks ==40274== indirectly lost: 0 bytes in 0 blocks ==40274== possibly lost: 0 bytes in 0 blocks ==40274== still reachable: 56 bytes in 3 blocks ==40274== suppressed: 15,315 bytes in 44 blocks ==40274== Reachable blocks (those to which a pointer was found) are not shown. ==40274== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40274== ==40274== For lists of detected and suppressed errors, rerun with: -s ==40274== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 29 from 29)