==25904== Memcheck, a memory error detector ==25904== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25904== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25904== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationsWithEllipticBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==25904== Parent PID: 24355 ==25904== ==25904== ==25904== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25904== Open file descriptor 12: ==25904== at 0x110D40FD: pipe (pipe.c:29) ==25904== by 0x1973607D: ??? ==25904== by 0x14CE94CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25904== by 0x10D21418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25904== by 0x10CBAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25904== by 0xF9B1D38: PetscInitialize (pinit.c:924) ==25904== by 0xF51DE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25904== by 0xF51DEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25904== by 0x1294E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25904== by 0x1249D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25904== by 0x126F4A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25904== by 0x126E45: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25904== by 0x127459: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25904== by 0x1231D5: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==25904== ==25904== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25904== at 0x110D8A9C: __open_nocancel (open64_nocancel.c:39) ==25904== by 0x1105CBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25904== by 0xF555822: ??? ==25904== by 0xF55596F: ??? ==25904== by 0x14D8E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25904== by 0x14D8E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25904== by 0x14D44922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25904== by 0x14CE92DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25904== by 0x10D21418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25904== by 0x10CBAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25904== by 0xF9B1D38: PetscInitialize (pinit.c:924) ==25904== by 0xF51DE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25904== by 0xF51DEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25904== by 0x1294E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25904== by 0x1249D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25904== by 0x126F4A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25904== by 0x126E45: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25904== by 0x127459: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25904== by 0x1231D5: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==25904== ==25904== Open file descriptor 145: ==25904== ==25904== ==25904== Open file descriptor 142: ==25904== ==25904== ==25904== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationsWithEllipticBoxDomainPdeModifier_valgrind.txt ==25904== ==25904== ==25904== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25904== ==25904== ==25904== ==25904== HEAP SUMMARY: ==25904== in use at exit: 15,371 bytes in 47 blocks ==25904== total heap usage: 7,849,452 allocs, 7,849,405 frees, 856,637,885 bytes allocated ==25904== ==25904== LEAK SUMMARY: ==25904== definitely lost: 0 bytes in 0 blocks ==25904== indirectly lost: 0 bytes in 0 blocks ==25904== possibly lost: 0 bytes in 0 blocks ==25904== still reachable: 56 bytes in 3 blocks ==25904== suppressed: 15,315 bytes in 44 blocks ==25904== Reachable blocks (those to which a pointer was found) are not shown. ==25904== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25904== ==25904== For lists of detected and suppressed errors, rerun with: -s ==25904== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 29 from 29)