==25442== Memcheck, a memory error detector ==25442== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25442== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25442== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellsGenerator -malloc_debug -malloc_dump -memory_info ==25442== Parent PID: 24062 ==25442== ==25442== ==25442== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25442== Open file descriptor 12: ==25442== at 0xF8800FD: pipe (pipe.c:29) ==25442== by 0x1973507D: ??? ==25442== by 0x12B784CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25442== by 0x10178418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25442== by 0x10111D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25442== by 0x10301D38: PetscInitialize (pinit.c:924) ==25442== by 0xF180E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25442== by 0xF180EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25442== by 0x1248EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25442== by 0x11F90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25442== by 0x122428: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25442== by 0x1222C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25442== by 0x12295F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25442== by 0x11DD35: main (TestCellsGenerator.cpp:19) ==25442== ==25442== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25442== at 0xF884A9C: __open_nocancel (open64_nocancel.c:39) ==25442== by 0xF808BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25442== by 0xF1B8822: ??? ==25442== by 0xF1B896F: ??? ==25442== by 0x12C1D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25442== by 0x12C1D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25442== by 0x12BD3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25442== by 0x12B782DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25442== by 0x10178418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25442== by 0x10111D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25442== by 0x10301D38: PetscInitialize (pinit.c:924) ==25442== by 0xF180E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25442== by 0xF180EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25442== by 0x1248EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25442== by 0x11F90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25442== by 0x122428: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25442== by 0x1222C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25442== by 0x12295F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25442== by 0x11DD35: main (TestCellsGenerator.cpp:19) ==25442== ==25442== Open file descriptor 145: ==25442== ==25442== ==25442== Open file descriptor 142: ==25442== ==25442== ==25442== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellsGenerator_valgrind.txt ==25442== ==25442== ==25442== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25442== ==25442== ==25442== ==25442== HEAP SUMMARY: ==25442== in use at exit: 15,508 bytes in 52 blocks ==25442== total heap usage: 52,967 allocs, 52,915 frees, 8,481,578 bytes allocated ==25442== ==25442== LEAK SUMMARY: ==25442== definitely lost: 0 bytes in 0 blocks ==25442== indirectly lost: 0 bytes in 0 blocks ==25442== possibly lost: 0 bytes in 0 blocks ==25442== still reachable: 120 bytes in 4 blocks ==25442== suppressed: 15,388 bytes in 48 blocks ==25442== Reachable blocks (those to which a pointer was found) are not shown. ==25442== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25442== ==25442== For lists of detected and suppressed errors, rerun with: -s ==25442== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)