==39690== Memcheck, a memory error detector ==39690== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==39690== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==39690== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellKillerTutorial -malloc_debug -malloc_dump -memory_info ==39690== Parent PID: 24062 ==39690== ==39690== ==39690== FILE DESCRIPTORS: 9 open (3 std) at exit. ==39690== Open file descriptor 12: ==39690== at 0x10E600FD: pipe (pipe.c:29) ==39690== by 0x1973507D: ??? ==39690== by 0x14CEC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39690== by 0x109C6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39690== by 0x1095FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39690== by 0xF656D38: PetscInitialize (pinit.c:924) ==39690== by 0xF180E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39690== by 0xF180EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39690== by 0x141179: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39690== by 0x13BF3F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39690== by 0x13E6FA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39690== by 0x13E5F5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39690== by 0x13EC09: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39690== by 0x13A735: main (TestCreatingAndUsingANewCellKillerTutorial.cpp:18) ==39690== ==39690== Open file descriptor 8: /dev/shm/open_mpi.0000 ==39690== at 0x10E64A9C: __open_nocancel (open64_nocancel.c:39) ==39690== by 0x10DE8BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==39690== by 0xF1B8822: ??? ==39690== by 0xF1B896F: ??? ==39690== by 0x14D916DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39690== by 0x14D91938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39690== by 0x14D47922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39690== by 0x14CEC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39690== by 0x109C6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39690== by 0x1095FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39690== by 0xF656D38: PetscInitialize (pinit.c:924) ==39690== by 0xF180E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39690== by 0xF180EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39690== by 0x141179: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39690== by 0x13BF3F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39690== by 0x13E6FA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39690== by 0x13E5F5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39690== by 0x13EC09: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39690== by 0x13A735: main (TestCreatingAndUsingANewCellKillerTutorial.cpp:18) ==39690== ==39690== Open file descriptor 145: ==39690== ==39690== ==39690== Open file descriptor 142: ==39690== ==39690== ==39690== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellKillerTutorial_valgrind.txt ==39690== ==39690== ==39690== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==39690== ==39690== ==39690== ==39690== HEAP SUMMARY: ==39690== in use at exit: 15,371 bytes in 47 blocks ==39690== total heap usage: 2,704,415 allocs, 2,704,368 frees, 177,700,535 bytes allocated ==39690== ==39690== LEAK SUMMARY: ==39690== definitely lost: 0 bytes in 0 blocks ==39690== indirectly lost: 0 bytes in 0 blocks ==39690== possibly lost: 0 bytes in 0 blocks ==39690== still reachable: 56 bytes in 3 blocks ==39690== suppressed: 15,315 bytes in 44 blocks ==39690== Reachable blocks (those to which a pointer was found) are not shown. ==39690== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==39690== ==39690== For lists of detected and suppressed errors, rerun with: -s ==39690== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 29 from 29)