==40551== Memcheck, a memory error detector ==40551== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40551== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40551== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestPottsBasedCryptSimulation -malloc_debug -malloc_dump -memory_info ==40551== Parent PID: 24062 ==40551== ==40551== ==40551== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40551== Open file descriptor 12: ==40551== at 0x111400FD: pipe (pipe.c:29) ==40551== by 0x1B3F807D: ??? ==40551== by 0x144324CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40551== by 0x11B63418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40551== by 0x11AFCD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40551== by 0x11CA8D38: PetscInitialize (pinit.c:924) ==40551== by 0x10A40E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40551== by 0x10A40EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40551== by 0x122076: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40551== by 0x11D6B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40551== by 0x11FAA6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40551== by 0x11F9A1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40551== by 0x11FFB5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40551== by 0x11BEB5: main (TestPottsBasedCryptSimulation.cpp:18) ==40551== ==40551== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40551== at 0x11144A9C: __open_nocancel (open64_nocancel.c:39) ==40551== by 0x110C8BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40551== by 0x10A78822: ??? ==40551== by 0x10A7896F: ??? ==40551== by 0x144D76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40551== by 0x144D7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40551== by 0x1448D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40551== by 0x144322DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40551== by 0x11B63418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40551== by 0x11AFCD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40551== by 0x11CA8D38: PetscInitialize (pinit.c:924) ==40551== by 0x10A40E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40551== by 0x10A40EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40551== by 0x122076: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40551== by 0x11D6B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40551== by 0x11FAA6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40551== by 0x11F9A1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40551== by 0x11FFB5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40551== by 0x11BEB5: main (TestPottsBasedCryptSimulation.cpp:18) ==40551== ==40551== Open file descriptor 145: ==40551== ==40551== ==40551== Open file descriptor 142: ==40551== ==40551== ==40551== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsBasedCryptSimulation_valgrind.txt ==40551== ==40551== ==40551== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40551== ==40551== ==40551== ==40551== HEAP SUMMARY: ==40551== in use at exit: 15,467 bytes in 48 blocks ==40551== total heap usage: 46,824,208 allocs, 46,824,160 frees, 4,260,400,216 bytes allocated ==40551== ==40551== LEAK SUMMARY: ==40551== definitely lost: 0 bytes in 0 blocks ==40551== indirectly lost: 0 bytes in 0 blocks ==40551== possibly lost: 0 bytes in 0 blocks ==40551== still reachable: 136 bytes in 4 blocks ==40551== suppressed: 15,331 bytes in 44 blocks ==40551== Reachable blocks (those to which a pointer was found) are not shown. ==40551== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40551== ==40551== For lists of detected and suppressed errors, rerun with: -s ==40551== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 29 from 29)