==25953== Memcheck, a memory error detector ==25953== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25953== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25953== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==25953== Parent PID: 24099 ==25953== ==25953== ==25953== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25953== Open file descriptor 12: ==25953== at 0xF10A0FD: pipe (pipe.c:29) ==25953== by 0x1972D07D: ??? ==25953== by 0x13CCC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25953== by 0xED57418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25953== by 0xECF0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25953== by 0xD9E7D38: PetscInitialize (pinit.c:924) ==25953== by 0xD50FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25953== by 0xD50FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25953== by 0x132BF5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25953== by 0x12BEE3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25953== by 0x12EA38: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25953== by 0x12E933: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25953== by 0x12EF47: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25953== by 0x12A6E5: main (TestCaUpdateRules.cpp:18) ==25953== ==25953== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25953== at 0xF10EA9C: __open_nocancel (open64_nocancel.c:39) ==25953== by 0xF092BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25953== by 0xD547822: ??? ==25953== by 0xD54796F: ??? ==25953== by 0x13D716DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25953== by 0x13D71938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25953== by 0x13D27922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25953== by 0x13CCC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25953== by 0xED57418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25953== by 0xECF0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25953== by 0xD9E7D38: PetscInitialize (pinit.c:924) ==25953== by 0xD50FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25953== by 0xD50FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25953== by 0x132BF5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25953== by 0x12BEE3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25953== by 0x12EA38: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25953== by 0x12E933: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25953== by 0x12EF47: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25953== by 0x12A6E5: main (TestCaUpdateRules.cpp:18) ==25953== ==25953== Open file descriptor 145: ==25953== ==25953== ==25953== Open file descriptor 142: ==25953== ==25953== ==25953== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==25953== ==25953== ==25953== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25953== ==25953== ==25953== ==25953== HEAP SUMMARY: ==25953== in use at exit: 15,444 bytes in 51 blocks ==25953== total heap usage: 39,020 allocs, 38,969 frees, 6,952,327 bytes allocated ==25953== ==25953== LEAK SUMMARY: ==25953== definitely lost: 0 bytes in 0 blocks ==25953== indirectly lost: 0 bytes in 0 blocks ==25953== possibly lost: 0 bytes in 0 blocks ==25953== still reachable: 56 bytes in 3 blocks ==25953== suppressed: 15,388 bytes in 48 blocks ==25953== Reachable blocks (those to which a pointer was found) are not shown. ==25953== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25953== ==25953== For lists of detected and suppressed errors, rerun with: -s ==25953== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)