==40025== Memcheck, a memory error detector ==40025== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40025== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40025== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellBasedSimulationModifierTutorial -malloc_debug -malloc_dump -memory_info ==40025== Parent PID: 24440 ==40025== ==40025== ==40025== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40025== Open file descriptor 12: ==40025== at 0x10D720FD: pipe (pipe.c:29) ==40025== by 0x1972E07D: ??? ==40025== by 0x14CE14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40025== by 0x109BF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40025== by 0x10958D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40025== by 0xF64FD38: PetscInitialize (pinit.c:924) ==40025== by 0xF179E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40025== by 0xF179EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40025== by 0x13161D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40025== by 0x12C98F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40025== by 0x12EEE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40025== by 0x12EDDB: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40025== by 0x12F3EF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40025== by 0x12B185: main (TestCreatingAndUsingANewCellBasedSimulationModifierTutorial.cpp:18) ==40025== ==40025== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40025== at 0x10D76A9C: __open_nocancel (open64_nocancel.c:39) ==40025== by 0x10CFABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40025== by 0xF1B1822: ??? ==40025== by 0xF1B196F: ??? ==40025== by 0x14D866DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40025== by 0x14D86938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40025== by 0x14D3C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40025== by 0x14CE12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40025== by 0x109BF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40025== by 0x10958D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40025== by 0xF64FD38: PetscInitialize (pinit.c:924) ==40025== by 0xF179E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40025== by 0xF179EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40025== by 0x13161D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40025== by 0x12C98F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40025== by 0x12EEE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40025== by 0x12EDDB: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40025== by 0x12F3EF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40025== by 0x12B185: main (TestCreatingAndUsingANewCellBasedSimulationModifierTutorial.cpp:18) ==40025== ==40025== Open file descriptor 145: ==40025== ==40025== ==40025== Open file descriptor 142: ==40025== ==40025== ==40025== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellBasedSimulationModifierTutorial_valgrind.txt ==40025== ==40025== ==40025== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40025== ==40025== ==40025== ==40025== HEAP SUMMARY: ==40025== in use at exit: 35,215 bytes in 290 blocks ==40025== total heap usage: 563,534 allocs, 563,244 frees, 320,610,762 bytes allocated ==40025== ==40025== LEAK SUMMARY: ==40025== definitely lost: 0 bytes in 0 blocks ==40025== indirectly lost: 0 bytes in 0 blocks ==40025== possibly lost: 0 bytes in 0 blocks ==40025== still reachable: 56 bytes in 3 blocks ==40025== suppressed: 35,159 bytes in 287 blocks ==40025== Reachable blocks (those to which a pointer was found) are not shown. ==40025== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40025== ==40025== For lists of detected and suppressed errors, rerun with: -s ==40025== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)