==40138== Memcheck, a memory error detector ==40138== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40138== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40138== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellMutationStateTutorial -malloc_debug -malloc_dump -memory_info ==40138== Parent PID: 24440 ==40138== ==40138== ==40138== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40138== Open file descriptor 12: ==40138== at 0x10D720FD: pipe (pipe.c:29) ==40138== by 0x1972E07D: ??? ==40138== by 0x14CE14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40138== by 0x109BF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40138== by 0x10958D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40138== by 0xF64FD38: PetscInitialize (pinit.c:924) ==40138== by 0xF179E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40138== by 0xF179EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40138== by 0x149987: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40138== by 0x1442D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40138== by 0x146FD2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40138== by 0x146E72: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40138== by 0x147509: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40138== by 0x1426F5: main (TestCreatingAndUsingANewCellMutationStateTutorial.cpp:19) ==40138== ==40138== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40138== at 0x10D76A9C: __open_nocancel (open64_nocancel.c:39) ==40138== by 0x10CFABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40138== by 0xF1B1822: ??? ==40138== by 0xF1B196F: ??? ==40138== by 0x14D866DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40138== by 0x14D86938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40138== by 0x14D3C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40138== by 0x14CE12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40138== by 0x109BF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40138== by 0x10958D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40138== by 0xF64FD38: PetscInitialize (pinit.c:924) ==40138== by 0xF179E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40138== by 0xF179EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40138== by 0x149987: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40138== by 0x1442D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40138== by 0x146FD2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40138== by 0x146E72: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40138== by 0x147509: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40138== by 0x1426F5: main (TestCreatingAndUsingANewCellMutationStateTutorial.cpp:19) ==40138== ==40138== Open file descriptor 145: ==40138== ==40138== ==40138== Open file descriptor 142: ==40138== ==40138== ==40138== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellMutationStateTutorial_valgrind.txt ==40138== ==40138== ==40138== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40138== ==40138== ==40138== ==40138== HEAP SUMMARY: ==40138== in use at exit: 35,142 bytes in 286 blocks ==40138== total heap usage: 4,248,487 allocs, 4,248,201 frees, 572,932,048 bytes allocated ==40138== ==40138== LEAK SUMMARY: ==40138== definitely lost: 0 bytes in 0 blocks ==40138== indirectly lost: 0 bytes in 0 blocks ==40138== possibly lost: 0 bytes in 0 blocks ==40138== still reachable: 56 bytes in 3 blocks ==40138== suppressed: 35,086 bytes in 283 blocks ==40138== Reachable blocks (those to which a pointer was found) are not shown. ==40138== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40138== ==40138== For lists of detected and suppressed errors, rerun with: -s ==40138== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)