==26237== Memcheck, a memory error detector ==26237== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26237== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26237== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestGoldbeter1991OdeSystem -malloc_debug -malloc_dump -memory_info ==26237== Parent PID: 24440 ==26237== ==26237== ==26237== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26237== Open file descriptor 12: ==26237== at 0xF0080FD: pipe (pipe.c:29) ==26237== by 0x1972F07D: ??? ==26237== by 0x13CD14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26237== by 0xEC55418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26237== by 0xEBEED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26237== by 0xD8E5D38: PetscInitialize (pinit.c:924) ==26237== by 0xD754E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26237== by 0xD754EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26237== by 0x124157: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26237== by 0x11F6A3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26237== by 0x121BF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26237== by 0x121AF0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26237== by 0x122103: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26237== by 0x11DEA5: main (TestGoldbeter1991OdeSystem.cpp:18) ==26237== ==26237== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26237== at 0xF00CA9C: __open_nocancel (open64_nocancel.c:39) ==26237== by 0xEF90BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26237== by 0xD78C822: ??? ==26237== by 0xD78C96F: ??? ==26237== by 0x13D766DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26237== by 0x13D76938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26237== by 0x13D2C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26237== by 0x13CD12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26237== by 0xEC55418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26237== by 0xEBEED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26237== by 0xD8E5D38: PetscInitialize (pinit.c:924) ==26237== by 0xD754E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26237== by 0xD754EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26237== by 0x124157: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26237== by 0x11F6A3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26237== by 0x121BF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26237== by 0x121AF0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26237== by 0x122103: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26237== by 0x11DEA5: main (TestGoldbeter1991OdeSystem.cpp:18) ==26237== ==26237== Open file descriptor 145: ==26237== ==26237== ==26237== Open file descriptor 142: ==26237== ==26237== ==26237== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestGoldbeter1991OdeSystem_valgrind.txt ==26237== ==26237== ==26237== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26237== ==26237== ==26237== ==26237== HEAP SUMMARY: ==26237== in use at exit: 35,183 bytes in 289 blocks ==26237== total heap usage: 47,010 allocs, 46,721 frees, 8,874,727 bytes allocated ==26237== ==26237== LEAK SUMMARY: ==26237== definitely lost: 0 bytes in 0 blocks ==26237== indirectly lost: 0 bytes in 0 blocks ==26237== possibly lost: 0 bytes in 0 blocks ==26237== still reachable: 24 bytes in 2 blocks ==26237== suppressed: 35,159 bytes in 287 blocks ==26237== Reachable blocks (those to which a pointer was found) are not shown. ==26237== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26237== ==26237== For lists of detected and suppressed errors, rerun with: -s ==26237== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)