==26341== Memcheck, a memory error detector ==26341== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26341== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26341== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsUpdateRules -malloc_debug -malloc_dump -memory_info ==26341== Parent PID: 24322 ==26341== ==26341== ==26341== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26341== Open file descriptor 12: ==26341== at 0xF10C0FD: pipe (pipe.c:29) ==26341== by 0x1972F07D: ??? ==26341== by 0x13CCE4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26341== by 0xED59418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26341== by 0xECF2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26341== by 0xD9E9D38: PetscInitialize (pinit.c:924) ==26341== by 0xD511E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26341== by 0xD511EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26341== by 0x133C55: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26341== by 0x12C93D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26341== by 0x12F6BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26341== by 0x12F55E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26341== by 0x12FBF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26341== by 0x12AD65: main (TestPottsUpdateRules.cpp:19) ==26341== ==26341== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26341== at 0xF110A9C: __open_nocancel (open64_nocancel.c:39) ==26341== by 0xF094BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26341== by 0xD549822: ??? ==26341== by 0xD54996F: ??? ==26341== by 0x13D736DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26341== by 0x13D73938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26341== by 0x13D29922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26341== by 0x13CCE2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26341== by 0xED59418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26341== by 0xECF2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26341== by 0xD9E9D38: PetscInitialize (pinit.c:924) ==26341== by 0xD511E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26341== by 0xD511EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26341== by 0x133C55: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26341== by 0x12C93D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26341== by 0x12F6BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26341== by 0x12F55E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26341== by 0x12FBF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26341== by 0x12AD65: main (TestPottsUpdateRules.cpp:19) ==26341== ==26341== Open file descriptor 145: ==26341== ==26341== ==26341== Open file descriptor 142: ==26341== ==26341== ==26341== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsUpdateRules_valgrind.txt ==26341== ==26341== ==26341== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26341== ==26341== ==26341== ==26341== HEAP SUMMARY: ==26341== in use at exit: 35,215 bytes in 290 blocks ==26341== total heap usage: 51,318 allocs, 51,028 frees, 8,897,391 bytes allocated ==26341== ==26341== LEAK SUMMARY: ==26341== definitely lost: 0 bytes in 0 blocks ==26341== indirectly lost: 0 bytes in 0 blocks ==26341== possibly lost: 0 bytes in 0 blocks ==26341== still reachable: 56 bytes in 3 blocks ==26341== suppressed: 35,159 bytes in 287 blocks ==26341== Reachable blocks (those to which a pointer was found) are not shown. ==26341== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26341== ==26341== For lists of detected and suppressed errors, rerun with: -s ==26341== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)