==25997== Memcheck, a memory error detector ==25997== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25997== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25997== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationTime -malloc_debug -malloc_dump -memory_info ==25997== Parent PID: 24322 ==25997== ==25997== ==25997== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25997== Open file descriptor 12: ==25997== at 0xD9100FD: pipe (pipe.c:29) ==25997== by 0x1973007D: ??? ==25997== by 0x12B1E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25997== by 0xFE6F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25997== by 0xFE08D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25997== by 0xFFB6D38: PetscInitialize (pinit.c:924) ==25997== by 0xD511E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25997== by 0xD511EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25997== by 0x15B7E4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25997== by 0x155E09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25997== by 0x158E6E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25997== by 0x158D0E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25997== by 0x1593A5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25997== by 0x154225: main (TestSimulationTime.cpp:19) ==25997== ==25997== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25997== at 0xD914A9C: __open_nocancel (open64_nocancel.c:39) ==25997== by 0xD898BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25997== by 0xD549822: ??? ==25997== by 0xD54996F: ??? ==25997== by 0x12BC36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25997== by 0x12BC3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25997== by 0x12B79922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25997== by 0x12B1E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25997== by 0xFE6F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25997== by 0xFE08D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25997== by 0xFFB6D38: PetscInitialize (pinit.c:924) ==25997== by 0xD511E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25997== by 0xD511EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25997== by 0x15B7E4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25997== by 0x155E09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25997== by 0x158E6E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25997== by 0x158D0E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25997== by 0x1593A5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25997== by 0x154225: main (TestSimulationTime.cpp:19) ==25997== ==25997== Open file descriptor 145: ==25997== ==25997== ==25997== Open file descriptor 142: ==25997== ==25997== ==25997== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationTime_valgrind.txt ==25997== ==25997== ==25997== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25997== ==25997== ==25997== ==25997== HEAP SUMMARY: ==25997== in use at exit: 35,183 bytes in 289 blocks ==25997== total heap usage: 36,991 allocs, 36,702 frees, 7,833,852 bytes allocated ==25997== ==25997== LEAK SUMMARY: ==25997== definitely lost: 0 bytes in 0 blocks ==25997== indirectly lost: 0 bytes in 0 blocks ==25997== possibly lost: 0 bytes in 0 blocks ==25997== still reachable: 24 bytes in 2 blocks ==25997== suppressed: 35,159 bytes in 287 blocks ==25997== Reachable blocks (those to which a pointer was found) are not shown. ==25997== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25997== ==25997== For lists of detected and suppressed errors, rerun with: -s ==25997== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)