==25939== Memcheck, a memory error detector ==25939== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25939== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25939== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==25939== Parent PID: 24076 ==25939== ==25939== ==25939== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25939== Open file descriptor 12: ==25939== at 0xF10A0FD: pipe (pipe.c:29) ==25939== by 0x1972E07D: ??? ==25939== by 0x13CCC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25939== by 0xED57418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25939== by 0xECF0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25939== by 0xD9E7D38: PetscInitialize (pinit.c:924) ==25939== by 0xD50FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25939== by 0xD50FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25939== by 0x132BF5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25939== by 0x12BEE3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25939== by 0x12EA38: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25939== by 0x12E933: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25939== by 0x12EF47: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25939== by 0x12A6E5: main (TestCaUpdateRules.cpp:18) ==25939== ==25939== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25939== at 0xF10EA9C: __open_nocancel (open64_nocancel.c:39) ==25939== by 0xF092BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25939== by 0xD54D822: ??? ==25939== by 0xD54D96F: ??? ==25939== by 0x13D716DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25939== by 0x13D71938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25939== by 0x13D27922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25939== by 0x13CCC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25939== by 0xED57418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25939== by 0xECF0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25939== by 0xD9E7D38: PetscInitialize (pinit.c:924) ==25939== by 0xD50FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25939== by 0xD50FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25939== by 0x132BF5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25939== by 0x12BEE3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25939== by 0x12EA38: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25939== by 0x12E933: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25939== by 0x12EF47: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25939== by 0x12A6E5: main (TestCaUpdateRules.cpp:18) ==25939== ==25939== Open file descriptor 145: ==25939== ==25939== ==25939== Open file descriptor 142: ==25939== ==25939== ==25939== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==25939== ==25939== ==25939== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25939== ==25939== ==25939== ==25939== HEAP SUMMARY: ==25939== in use at exit: 35,199 bytes in 290 blocks ==25939== total heap usage: 39,547 allocs, 39,257 frees, 8,116,150 bytes allocated ==25939== ==25939== LEAK SUMMARY: ==25939== definitely lost: 0 bytes in 0 blocks ==25939== indirectly lost: 0 bytes in 0 blocks ==25939== possibly lost: 0 bytes in 0 blocks ==25939== still reachable: 56 bytes in 3 blocks ==25939== suppressed: 35,143 bytes in 287 blocks ==25939== Reachable blocks (those to which a pointer was found) are not shown. ==25939== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25939== ==25939== For lists of detected and suppressed errors, rerun with: -s ==25939== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)