==40827== Memcheck, a memory error detector ==40827== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40827== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40827== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestArchivingExtendedBidomain -malloc_debug -malloc_dump -memory_info ==40827== Parent PID: 23996 ==40827== ==40827== ==40827== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40827== Open file descriptor 12: ==40827== at 0xBD820FD: pipe (pipe.c:29) ==40827== by 0x1436007D: ??? ==40827== by 0xFB1E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40827== by 0xB68C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40827== by 0xB625D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40827== by 0x8271D38: PetscInitialize (pinit.c:924) ==40827== by 0xB554E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40827== by 0xB554EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40827== by 0x12EEDE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40827== by 0x129C33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40827== by 0x12CAFA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40827== by 0x12C9F5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40827== by 0x12D009: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40827== by 0x1283E5: main (TestArchivingExtendedBidomain.cpp:18) ==40827== ==40827== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40827== at 0xBD86A9C: __open_nocancel (open64_nocancel.c:39) ==40827== by 0xBD0ABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40827== by 0x811C822: ??? ==40827== by 0x811C96F: ??? ==40827== by 0xFBC36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40827== by 0xFBC3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40827== by 0xFB79922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40827== by 0xFB1E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40827== by 0xB68C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40827== by 0xB625D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40827== by 0x8271D38: PetscInitialize (pinit.c:924) ==40827== by 0xB554E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40827== by 0xB554EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40827== by 0x12EEDE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40827== by 0x129C33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40827== by 0x12CAFA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40827== by 0x12C9F5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40827== by 0x12D009: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40827== by 0x1283E5: main (TestArchivingExtendedBidomain.cpp:18) ==40827== ==40827== Open file descriptor 145: ==40827== ==40827== ==40827== Open file descriptor 142: ==40827== ==40827== ==40827== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestArchivingExtendedBidomain_valgrind.txt ==40827== ==40827== ==40827== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40827== ==40827== ==40827== ==40827== HEAP SUMMARY: ==40827== in use at exit: 37,133 bytes in 320 blocks ==40827== total heap usage: 335,959 allocs, 335,639 frees, 108,990,289 bytes allocated ==40827== ==40827== LEAK SUMMARY: ==40827== definitely lost: 0 bytes in 0 blocks ==40827== indirectly lost: 0 bytes in 0 blocks ==40827== possibly lost: 0 bytes in 0 blocks ==40827== still reachable: 24 bytes in 2 blocks ==40827== suppressed: 37,109 bytes in 318 blocks ==40827== Reachable blocks (those to which a pointer was found) are not shown. ==40827== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40827== ==40827== For lists of detected and suppressed errors, rerun with: -s ==40827== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 52 from 35)