==40798== Memcheck, a memory error detector ==40798== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40798== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40798== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainProblem -malloc_debug -malloc_dump -memory_info ==40798== Parent PID: 23996 ==40798== ==40798== ==40798== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40798== Open file descriptor 12: ==40798== at 0xC1210FD: pipe (pipe.c:29) ==40798== by 0x1436007D: ??? ==40798== by 0xFB1E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40798== by 0xBA29418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40798== by 0xB9C2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40798== by 0x8271D38: PetscInitialize (pinit.c:924) ==40798== by 0xB8F1E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40798== by 0xB8F1EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40798== by 0x140886: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40798== by 0x13A03D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40798== by 0x13D718: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40798== by 0x13D5B8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40798== by 0x13DC4F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40798== by 0x1382C5: main (TestBidomainProblem.cpp:19) ==40798== ==40798== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40798== at 0xC125A9C: __open_nocancel (open64_nocancel.c:39) ==40798== by 0xC0A9BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40798== by 0x811C822: ??? ==40798== by 0x811C96F: ??? ==40798== by 0xFBC36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40798== by 0xFBC3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40798== by 0xFB79922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40798== by 0xFB1E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40798== by 0xBA29418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40798== by 0xB9C2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40798== by 0x8271D38: PetscInitialize (pinit.c:924) ==40798== by 0xB8F1E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40798== by 0xB8F1EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40798== by 0x140886: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40798== by 0x13A03D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40798== by 0x13D718: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40798== by 0x13D5B8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40798== by 0x13DC4F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40798== by 0x1382C5: main (TestBidomainProblem.cpp:19) ==40798== ==40798== Open file descriptor 145: ==40798== ==40798== ==40798== Open file descriptor 142: ==40798== ==40798== ==40798== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainProblem_valgrind.txt ==40798== ==40798== ==40798== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40798== ==40798== ==40798== ==40798== HEAP SUMMARY: ==40798== in use at exit: 37,133 bytes in 320 blocks ==40798== total heap usage: 568,710 allocs, 568,390 frees, 217,937,080 bytes allocated ==40798== ==40798== LEAK SUMMARY: ==40798== definitely lost: 0 bytes in 0 blocks ==40798== indirectly lost: 0 bytes in 0 blocks ==40798== possibly lost: 0 bytes in 0 blocks ==40798== still reachable: 24 bytes in 2 blocks ==40798== suppressed: 37,109 bytes in 318 blocks ==40798== Reachable blocks (those to which a pointer was found) are not shown. ==40798== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40798== ==40798== For lists of detected and suppressed errors, rerun with: -s ==40798== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 100 from 35)