==40797== Memcheck, a memory error detector ==40797== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40797== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40797== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainTissue -malloc_debug -malloc_dump -memory_info ==40797== Parent PID: 23996 ==40797== ==40797== ==40797== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40797== Open file descriptor 12: ==40797== at 0xBBD80FD: pipe (pipe.c:29) ==40797== by 0x1436007D: ??? ==40797== by 0xFB6B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40797== by 0xBFA6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40797== by 0xBF3FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40797== by 0x8271D38: PetscInitialize (pinit.c:924) ==40797== by 0xB4DFE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40797== by 0xB4DFEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40797== by 0x1397E0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40797== by 0x133F03: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40797== by 0x136652: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40797== by 0x13654E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40797== by 0x136B61: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40797== by 0x132705: main (TestBidomainTissue.cpp:18) ==40797== ==40797== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40797== at 0xBBDCA9C: __open_nocancel (open64_nocancel.c:39) ==40797== by 0xBB60BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40797== by 0x811C822: ??? ==40797== by 0x811C96F: ??? ==40797== by 0xFC106DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40797== by 0xFC10938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40797== by 0xFBC6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40797== by 0xFB6B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40797== by 0xBFA6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40797== by 0xBF3FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40797== by 0x8271D38: PetscInitialize (pinit.c:924) ==40797== by 0xB4DFE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40797== by 0xB4DFEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40797== by 0x1397E0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40797== by 0x133F03: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40797== by 0x136652: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40797== by 0x13654E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40797== by 0x136B61: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40797== by 0x132705: main (TestBidomainTissue.cpp:18) ==40797== ==40797== Open file descriptor 145: ==40797== ==40797== ==40797== Open file descriptor 142: ==40797== ==40797== ==40797== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainTissue_valgrind.txt ==40797== ==40797== ==40797== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40797== ==40797== ==40797== ==40797== HEAP SUMMARY: ==40797== in use at exit: 36,653 bytes in 310 blocks ==40797== total heap usage: 175,834 allocs, 175,524 frees, 50,015,820 bytes allocated ==40797== ==40797== LEAK SUMMARY: ==40797== definitely lost: 0 bytes in 0 blocks ==40797== indirectly lost: 0 bytes in 0 blocks ==40797== possibly lost: 0 bytes in 0 blocks ==40797== still reachable: 24 bytes in 2 blocks ==40797== suppressed: 36,629 bytes in 308 blocks ==40797== Reachable blocks (those to which a pointer was found) are not shown. ==40797== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40797== ==40797== For lists of detected and suppressed errors, rerun with: -s ==40797== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)