==25793== Memcheck, a memory error detector ==25793== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25793== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25793== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellKillers -malloc_debug -malloc_dump -memory_info ==25793== Parent PID: 23996 ==25793== ==25793== ==25793== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25793== Open file descriptor 12: ==25793== at 0x10E5A0FD: pipe (pipe.c:29) ==25793== by 0x1973107D: ??? ==25793== by 0x14CE14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25793== by 0x109C0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25793== by 0x10959D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25793== by 0xF650D38: PetscInitialize (pinit.c:924) ==25793== by 0xF17AE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25793== by 0xF17AEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25793== by 0x1A5381: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25793== by 0x19D279: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25793== by 0x1A08BC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25793== by 0x1A075C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25793== by 0x1A0DF3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25793== by 0x19B695: main (TestCellKillers.cpp:19) ==25793== ==25793== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25793== at 0x10E5EA9C: __open_nocancel (open64_nocancel.c:39) ==25793== by 0x10DE2BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25793== by 0xF1B8822: ??? ==25793== by 0xF1B896F: ??? ==25793== by 0x14D886DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25793== by 0x14D88938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25793== by 0x14D3E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25793== by 0x14CE12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25793== by 0x109C0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25793== by 0x10959D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25793== by 0xF650D38: PetscInitialize (pinit.c:924) ==25793== by 0xF17AE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25793== by 0xF17AEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25793== by 0x1A5381: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25793== by 0x19D279: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25793== by 0x1A08BC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25793== by 0x1A075C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25793== by 0x1A0DF3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25793== by 0x19B695: main (TestCellKillers.cpp:19) ==25793== ==25793== Open file descriptor 145: ==25793== ==25793== ==25793== Open file descriptor 142: ==25793== ==25793== ==25793== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellKillers_valgrind.txt ==25793== ==25793== ==25793== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25793== ==25793== ==25793== ==25793== HEAP SUMMARY: ==25793== in use at exit: 36,669 bytes in 311 blocks ==25793== total heap usage: 106,044 allocs, 105,733 frees, 13,319,585 bytes allocated ==25793== ==25793== LEAK SUMMARY: ==25793== definitely lost: 0 bytes in 0 blocks ==25793== indirectly lost: 0 bytes in 0 blocks ==25793== possibly lost: 0 bytes in 0 blocks ==25793== still reachable: 56 bytes in 3 blocks ==25793== suppressed: 36,613 bytes in 308 blocks ==25793== Reachable blocks (those to which a pointer was found) are not shown. ==25793== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25793== ==25793== For lists of detected and suppressed errors, rerun with: -s ==25793== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)