==39518== Memcheck, a memory error detector ==39518== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==39518== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==39518== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellKillerTutorial -malloc_debug -malloc_dump -memory_info ==39518== Parent PID: 23996 ==39518== ==39518== ==39518== FILE DESCRIPTORS: 9 open (3 std) at exit. ==39518== Open file descriptor 12: ==39518== at 0x10E5A0FD: pipe (pipe.c:29) ==39518== by 0x1973107D: ??? ==39518== by 0x14CE14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39518== by 0x109C0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39518== by 0x10959D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39518== by 0xF650D38: PetscInitialize (pinit.c:924) ==39518== by 0xF17AE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39518== by 0xF17AEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39518== by 0x141179: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39518== by 0x13BF3F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39518== by 0x13E6FA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39518== by 0x13E5F5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39518== by 0x13EC09: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39518== by 0x13A735: main (TestCreatingAndUsingANewCellKillerTutorial.cpp:18) ==39518== ==39518== Open file descriptor 8: /dev/shm/open_mpi.0000 ==39518== at 0x10E5EA9C: __open_nocancel (open64_nocancel.c:39) ==39518== by 0x10DE2BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==39518== by 0xF1B8822: ??? ==39518== by 0xF1B896F: ??? ==39518== by 0x14D886DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39518== by 0x14D88938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39518== by 0x14D3E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39518== by 0x14CE12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39518== by 0x109C0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39518== by 0x10959D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39518== by 0xF650D38: PetscInitialize (pinit.c:924) ==39518== by 0xF17AE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39518== by 0xF17AEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39518== by 0x141179: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39518== by 0x13BF3F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39518== by 0x13E6FA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39518== by 0x13E5F5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39518== by 0x13EC09: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39518== by 0x13A735: main (TestCreatingAndUsingANewCellKillerTutorial.cpp:18) ==39518== ==39518== Open file descriptor 145: ==39518== ==39518== ==39518== Open file descriptor 142: ==39518== ==39518== ==39518== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellKillerTutorial_valgrind.txt ==39518== ==39518== ==39518== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==39518== ==39518== ==39518== ==39518== HEAP SUMMARY: ==39518== in use at exit: 36,596 bytes in 307 blocks ==39518== total heap usage: 2,704,612 allocs, 2,704,305 frees, 178,868,364 bytes allocated ==39518== ==39518== LEAK SUMMARY: ==39518== definitely lost: 0 bytes in 0 blocks ==39518== indirectly lost: 0 bytes in 0 blocks ==39518== possibly lost: 0 bytes in 0 blocks ==39518== still reachable: 56 bytes in 3 blocks ==39518== suppressed: 36,540 bytes in 304 blocks ==39518== Reachable blocks (those to which a pointer was found) are not shown. ==39518== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==39518== ==39518== For lists of detected and suppressed errors, rerun with: -s ==39518== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)