==40971== Memcheck, a memory error detector ==40971== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40971== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40971== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCvodeCells -malloc_debug -malloc_dump -memory_info ==40971== Parent PID: 23996 ==40971== ==40971== ==40971== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40971== Open file descriptor 12: ==40971== at 0x9D470FD: pipe (pipe.c:29) ==40971== by 0x1436007D: ??? ==40971== by 0xEE574CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40971== by 0x9994418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40971== by 0x992DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40971== by 0x8271D38: PetscInitialize (pinit.c:924) ==40971== by 0x985CE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40971== by 0x985CEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40971== by 0x1353CF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40971== by 0x12FB8B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40971== by 0x132882: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40971== by 0x132722: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40971== by 0x132DB9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40971== by 0x12AB65: main (TestCvodeCells.cpp:19) ==40971== ==40971== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40971== at 0x9D4BA9C: __open_nocancel (open64_nocancel.c:39) ==40971== by 0x9CCFBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40971== by 0x811C822: ??? ==40971== by 0x811C96F: ??? ==40971== by 0xEEFE6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40971== by 0xEEFE938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40971== by 0xEEB4922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40971== by 0xEE572DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40971== by 0x9994418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40971== by 0x992DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40971== by 0x8271D38: PetscInitialize (pinit.c:924) ==40971== by 0x985CE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40971== by 0x985CEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40971== by 0x1353CF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40971== by 0x12FB8B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40971== by 0x132882: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40971== by 0x132722: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40971== by 0x132DB9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40971== by 0x12AB65: main (TestCvodeCells.cpp:19) ==40971== ==40971== Open file descriptor 145: ==40971== ==40971== ==40971== Open file descriptor 142: ==40971== ==40971== ==40971== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCvodeCells_valgrind.txt ==40971== ==40971== ==40971== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40971== ==40971== ==40971== ==40971== HEAP SUMMARY: ==40971== in use at exit: 38,351 bytes in 310 blocks ==40971== total heap usage: 214,796 allocs, 214,486 frees, 32,865,465 bytes allocated ==40971== ==40971== LEAK SUMMARY: ==40971== definitely lost: 0 bytes in 0 blocks ==40971== indirectly lost: 0 bytes in 0 blocks ==40971== possibly lost: 0 bytes in 0 blocks ==40971== still reachable: 1,795 bytes in 6 blocks ==40971== suppressed: 36,556 bytes in 304 blocks ==40971== Reachable blocks (those to which a pointer was found) are not shown. ==40971== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40971== ==40971== For lists of detected and suppressed errors, rerun with: -s ==40971== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)