==41303== Memcheck, a memory error detector ==41303== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41303== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41303== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestGeneralizedRushLarsen -malloc_debug -malloc_dump -memory_info ==41303== Parent PID: 23996 ==41303== ==41303== ==41303== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41303== Open file descriptor 12: ==41303== at 0x87DB0FD: pipe (pipe.c:29) ==41303== by 0x1436007D: ??? ==41303== by 0xC8D74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41303== by 0x8BA9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41303== by 0x8B42D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41303== by 0x9084D38: PetscInitialize (pinit.c:924) ==41303== by 0x8406E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41303== by 0x8406EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41303== by 0x11C6A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41303== by 0x1178AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41303== by 0x11A2AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41303== by 0x11A14C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41303== by 0x11A7E3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41303== by 0x115CD5: main (TestGeneralizedRushLarsen.cpp:19) ==41303== ==41303== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41303== at 0x87DFA9C: __open_nocancel (open64_nocancel.c:39) ==41303== by 0x8763BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41303== by 0x8444822: ??? ==41303== by 0x844496F: ??? ==41303== by 0xC97C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41303== by 0xC97C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41303== by 0xC932922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41303== by 0xC8D72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41303== by 0x8BA9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41303== by 0x8B42D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41303== by 0x9084D38: PetscInitialize (pinit.c:924) ==41303== by 0x8406E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41303== by 0x8406EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41303== by 0x11C6A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41303== by 0x1178AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41303== by 0x11A2AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41303== by 0x11A14C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41303== by 0x11A7E3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41303== by 0x115CD5: main (TestGeneralizedRushLarsen.cpp:19) ==41303== ==41303== Open file descriptor 145: ==41303== ==41303== ==41303== Open file descriptor 142: ==41303== ==41303== ==41303== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestGeneralizedRushLarsen_valgrind.txt ==41303== ==41303== ==41303== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41303== ==41303== ==41303== ==41303== HEAP SUMMARY: ==41303== in use at exit: 40,185 bytes in 314 blocks ==41303== total heap usage: 3,037,994 allocs, 3,037,680 frees, 281,672,226 bytes allocated ==41303== ==41303== LEAK SUMMARY: ==41303== definitely lost: 0 bytes in 0 blocks ==41303== indirectly lost: 0 bytes in 0 blocks ==41303== possibly lost: 0 bytes in 0 blocks ==41303== still reachable: 3,629 bytes in 10 blocks ==41303== suppressed: 36,556 bytes in 304 blocks ==41303== Reachable blocks (those to which a pointer was found) are not shown. ==41303== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41303== ==41303== For lists of detected and suppressed errors, rerun with: -s ==41303== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)