==26481== Memcheck, a memory error detector ==26481== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26481== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26481== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==26481== Parent PID: 23996 ==26481== ==26481== ==26481== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26481== Open file descriptor 12: ==26481== at 0xF9A50FD: pipe (pipe.c:29) ==26481== by 0x1973307D: ??? ==26481== by 0x12B784CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26481== by 0x1029D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26481== by 0x10236D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26481== by 0x103E2D38: PetscInitialize (pinit.c:924) ==26481== by 0xF17AE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26481== by 0xF17AEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26481== by 0x2136B0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26481== by 0x20AE59: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26481== by 0x20EAA8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26481== by 0x20E948: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26481== by 0x20EFDF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26481== by 0x209275: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==26481== ==26481== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26481== at 0xF9A9A9C: __open_nocancel (open64_nocancel.c:39) ==26481== by 0xF92DBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26481== by 0xF1B8822: ??? ==26481== by 0xF1B896F: ??? ==26481== by 0x12C1D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26481== by 0x12C1D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26481== by 0x12BD3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26481== by 0x12B782DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26481== by 0x1029D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26481== by 0x10236D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26481== by 0x103E2D38: PetscInitialize (pinit.c:924) ==26481== by 0xF17AE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26481== by 0xF17AEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26481== by 0x2136B0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26481== by 0x20AE59: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26481== by 0x20EAA8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26481== by 0x20E948: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26481== by 0x20EFDF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26481== by 0x209275: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==26481== ==26481== Open file descriptor 145: ==26481== ==26481== ==26481== Open file descriptor 142: ==26481== ==26481== ==26481== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithNodeBasedCellPopulation_valgrind.txt ==26481== ==26481== ==26481== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26481== ==26481== ==26481== ==26481== HEAP SUMMARY: ==26481== in use at exit: 36,628 bytes in 308 blocks ==26481== total heap usage: 18,260,575 allocs, 18,260,267 frees, 28,716,409,240 bytes allocated ==26481== ==26481== LEAK SUMMARY: ==26481== definitely lost: 0 bytes in 0 blocks ==26481== indirectly lost: 0 bytes in 0 blocks ==26481== possibly lost: 0 bytes in 0 blocks ==26481== still reachable: 88 bytes in 4 blocks ==26481== suppressed: 36,540 bytes in 304 blocks ==26481== Reachable blocks (those to which a pointer was found) are not shown. ==26481== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26481== ==26481== For lists of detected and suppressed errors, rerun with: -s ==26481== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)