==40410== Memcheck, a memory error detector ==40410== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40410== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40410== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestPottsBasedCryptSimulation -malloc_debug -malloc_dump -memory_info ==40410== Parent PID: 23996 ==40410== ==40410== ==40410== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40410== Open file descriptor 12: ==40410== at 0x1113A0FD: pipe (pipe.c:29) ==40410== by 0x1B3F307D: ??? ==40410== by 0x144324CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40410== by 0x11B5D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40410== by 0x11AF6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40410== by 0x11CA2D38: PetscInitialize (pinit.c:924) ==40410== by 0x10A3AE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40410== by 0x10A3AEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40410== by 0x122076: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40410== by 0x11D6B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40410== by 0x11FAA6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40410== by 0x11F9A1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40410== by 0x11FFB5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40410== by 0x11BEB5: main (TestPottsBasedCryptSimulation.cpp:18) ==40410== ==40410== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40410== at 0x1113EA9C: __open_nocancel (open64_nocancel.c:39) ==40410== by 0x110C2BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40410== by 0x10A78822: ??? ==40410== by 0x10A7896F: ??? ==40410== by 0x144D76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40410== by 0x144D7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40410== by 0x1448D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40410== by 0x144322DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40410== by 0x11B5D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40410== by 0x11AF6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40410== by 0x11CA2D38: PetscInitialize (pinit.c:924) ==40410== by 0x10A3AE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40410== by 0x10A3AEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40410== by 0x122076: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40410== by 0x11D6B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40410== by 0x11FAA6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40410== by 0x11F9A1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40410== by 0x11FFB5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40410== by 0x11BEB5: main (TestPottsBasedCryptSimulation.cpp:18) ==40410== ==40410== Open file descriptor 145: ==40410== ==40410== ==40410== Open file descriptor 142: ==40410== ==40410== ==40410== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsBasedCryptSimulation_valgrind.txt ==40410== ==40410== ==40410== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40410== ==40410== ==40410== ==40410== HEAP SUMMARY: ==40410== in use at exit: 36,692 bytes in 308 blocks ==40410== total heap usage: 46,824,407 allocs, 46,824,099 frees, 4,261,568,889 bytes allocated ==40410== ==40410== LEAK SUMMARY: ==40410== definitely lost: 0 bytes in 0 blocks ==40410== indirectly lost: 0 bytes in 0 blocks ==40410== possibly lost: 0 bytes in 0 blocks ==40410== still reachable: 136 bytes in 4 blocks ==40410== suppressed: 36,556 bytes in 304 blocks ==40410== Reachable blocks (those to which a pointer was found) are not shown. ==40410== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40410== ==40410== For lists of detected and suppressed errors, rerun with: -s ==40410== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 31 from 31)