==43559== Memcheck, a memory error detector ==43559== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==43559== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==43559== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCardiacSimulation -malloc_debug -malloc_dump -memory_info ==43559== Parent PID: 24161 ==43559== ==43559== ==43559== FILE DESCRIPTORS: 9 open (3 std) at exit. ==43559== Open file descriptor 12: ==43559== at 0x89510FD: pipe (pipe.c:29) ==43559== by 0x1436007D: ??? ==43559== by 0xCCD94CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43559== by 0x8D1F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43559== by 0x8CB8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43559== by 0x91FCD38: PetscInitialize (pinit.c:924) ==43559== by 0x8237E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43559== by 0x8237EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43559== by 0x1202B8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43559== by 0x11A98D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43559== by 0x11E13C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43559== by 0x11DFDC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43559== by 0x11E673: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43559== by 0x118DB5: main (TestCardiacSimulation.cpp:19) ==43559== ==43559== Open file descriptor 8: /dev/shm/open_mpi.0000 ==43559== at 0x8955A9C: __open_nocancel (open64_nocancel.c:39) ==43559== by 0x88D9BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==43559== by 0x8275822: ??? ==43559== by 0x827596F: ??? ==43559== by 0xCD7E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43559== by 0xCD7E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43559== by 0xCD34922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43559== by 0xCCD92DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43559== by 0x8D1F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43559== by 0x8CB8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43559== by 0x91FCD38: PetscInitialize (pinit.c:924) ==43559== by 0x8237E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43559== by 0x8237EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43559== by 0x1202B8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43559== by 0x11A98D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43559== by 0x11E13C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43559== by 0x11DFDC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43559== by 0x11E673: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43559== by 0x118DB5: main (TestCardiacSimulation.cpp:19) ==43559== ==43559== Open file descriptor 145: ==43559== ==43559== ==43559== Open file descriptor 142: ==43559== ==43559== ==43559== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCardiacSimulation_valgrind.txt ==43559== ==43559== ==43559== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==43559== ==43559== ==43559== ==43559== HEAP SUMMARY: ==43559== in use at exit: 42,722 bytes in 311 blocks ==43559== total heap usage: 4,740,715 allocs, 4,740,404 frees, 1,497,535,313 bytes allocated ==43559== ==43559== LEAK SUMMARY: ==43559== definitely lost: 0 bytes in 0 blocks ==43559== indirectly lost: 0 bytes in 0 blocks ==43559== possibly lost: 0 bytes in 0 blocks ==43559== still reachable: 7,156 bytes in 18 blocks ==43559== suppressed: 35,566 bytes in 293 blocks ==43559== Reachable blocks (those to which a pointer was found) are not shown. ==43559== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==43559== ==43559== For lists of detected and suppressed errors, rerun with: -s ==43559== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 228 from 31)