==40970== Memcheck, a memory error detector ==40970== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40970== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40970== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/lung/test/TestMultiLobeAirwayGenerator -malloc_debug -malloc_dump -memory_info ==40970== Parent PID: 24103 ==40970== ==40970== ==40970== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40970== Open file descriptor 12: ==40970== at 0x8D480FD: pipe (pipe.c:29) ==40970== by 0x107C307D: ??? ==40970== by 0xBE2C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40970== by 0x7B4C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40970== by 0x7AE5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40970== by 0x4A6CD38: PetscInitialize (pinit.c:924) ==40970== by 0x7A0BE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40970== by 0x7A0BEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40970== by 0x11A3B7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40970== by 0x11592D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40970== by 0x118434: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40970== by 0x1182D4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40970== by 0x11896B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40970== by 0x113D55: main (TestMultiLobeAirwayGenerator.cpp:19) ==40970== ==40970== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40970== at 0x8D4CA9C: __open_nocancel (open64_nocancel.c:39) ==40970== by 0x8CD0BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40970== by 0x7A49822: ??? ==40970== by 0x7A4996F: ??? ==40970== by 0xBED16DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40970== by 0xBED1938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40970== by 0xBE87922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40970== by 0xBE2C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40970== by 0x7B4C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40970== by 0x7AE5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40970== by 0x4A6CD38: PetscInitialize (pinit.c:924) ==40970== by 0x7A0BE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40970== by 0x7A0BEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40970== by 0x11A3B7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40970== by 0x11592D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40970== by 0x118434: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40970== by 0x1182D4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40970== by 0x11896B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40970== by 0x113D55: main (TestMultiLobeAirwayGenerator.cpp:19) ==40970== ==40970== Open file descriptor 145: ==40970== ==40970== ==40970== Open file descriptor 142: ==40970== ==40970== ==40970== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMultiLobeAirwayGenerator_valgrind.txt ==40970== ==40970== ==40970== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40970== ==40970== ==40970== ==40970== HEAP SUMMARY: ==40970== in use at exit: 35,167 bytes in 289 blocks ==40970== total heap usage: 105,084 allocs, 104,795 frees, 59,372,992 bytes allocated ==40970== ==40970== LEAK SUMMARY: ==40970== definitely lost: 0 bytes in 0 blocks ==40970== indirectly lost: 0 bytes in 0 blocks ==40970== possibly lost: 0 bytes in 0 blocks ==40970== still reachable: 24 bytes in 2 blocks ==40970== suppressed: 35,143 bytes in 287 blocks ==40970== Reachable blocks (those to which a pointer was found) are not shown. ==40970== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40970== ==40970== For lists of detected and suppressed errors, rerun with: -s ==40970== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)