==40584== Memcheck, a memory error detector ==40584== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40584== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40584== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/lung/test/TestAirwayGenerator -malloc_debug -malloc_dump -memory_info ==40584== Parent PID: 23896 ==40584== ==40584== ==40584== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40584== Open file descriptor 12: ==40584== at 0x6BE00FD: pipe (pipe.c:29) ==40584== by 0x107C207D: ??? ==40584== by 0xB7654CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40584== by 0x5EE5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40584== by 0x5E7ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40584== by 0x4A6CD38: PetscInitialize (pinit.c:924) ==40584== by 0x5DA4E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40584== by 0x5DA4EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40584== by 0x11872F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40584== by 0x11390D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40584== by 0x1166E8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40584== by 0x116588: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40584== by 0x116C1F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40584== by 0x111D35: main (TestAirwayGenerator.cpp:19) ==40584== ==40584== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40584== at 0x6BE4A9C: __open_nocancel (open64_nocancel.c:39) ==40584== by 0x6B68BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40584== by 0x5DDC822: ??? ==40584== by 0x5DDC96F: ??? ==40584== by 0xB80C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40584== by 0xB80C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40584== by 0xB7C2922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40584== by 0xB7652DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40584== by 0x5EE5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40584== by 0x5E7ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40584== by 0x4A6CD38: PetscInitialize (pinit.c:924) ==40584== by 0x5DA4E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40584== by 0x5DA4EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40584== by 0x11872F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40584== by 0x11390D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40584== by 0x1166E8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40584== by 0x116588: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40584== by 0x116C1F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40584== by 0x111D35: main (TestAirwayGenerator.cpp:19) ==40584== ==40584== Open file descriptor 145: ==40584== ==40584== ==40584== Open file descriptor 142: ==40584== ==40584== ==40584== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestAirwayGenerator_valgrind.txt ==40584== ==40584== ==40584== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40584== ==40584== ==40584== ==40584== HEAP SUMMARY: ==40584== in use at exit: 36,653 bytes in 310 blocks ==40584== total heap usage: 233,724 allocs, 233,414 frees, 256,441,749 bytes allocated ==40584== ==40584== LEAK SUMMARY: ==40584== definitely lost: 0 bytes in 0 blocks ==40584== indirectly lost: 0 bytes in 0 blocks ==40584== possibly lost: 0 bytes in 0 blocks ==40584== still reachable: 24 bytes in 2 blocks ==40584== suppressed: 36,629 bytes in 308 blocks ==40584== Reachable blocks (those to which a pointer was found) are not shown. ==40584== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40584== ==40584== For lists of detected and suppressed errors, rerun with: -s ==40584== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)