==25187== Memcheck, a memory error detector ==25187== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25187== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25187== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCell -malloc_debug -malloc_dump -memory_info ==25187== Parent PID: 23896 ==25187== ==25187== ==25187== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25187== Open file descriptor 12: ==25187== at 0xED810FD: pipe (pipe.c:29) ==25187== by 0x1972E07D: ??? ==25187== by 0x13C7F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25187== by 0xE9D0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25187== by 0xE969D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25187== by 0xD63DD38: PetscInitialize (pinit.c:924) ==25187== by 0xD50FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25187== by 0xD50FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25187== by 0x1291DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25187== by 0x123ECD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25187== by 0x126DAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25187== by 0x126C4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25187== by 0x1272E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25187== by 0x1222F5: main (TestCell.cpp:19) ==25187== ==25187== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25187== at 0xED85A9C: __open_nocancel (open64_nocancel.c:39) ==25187== by 0xED09BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25187== by 0xE8C7822: ??? ==25187== by 0xE8C796F: ??? ==25187== by 0x13D246DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25187== by 0x13D24938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25187== by 0x13CDA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25187== by 0x13C7F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25187== by 0xE9D0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25187== by 0xE969D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25187== by 0xD63DD38: PetscInitialize (pinit.c:924) ==25187== by 0xD50FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25187== by 0xD50FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25187== by 0x1291DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25187== by 0x123ECD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25187== by 0x126DAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25187== by 0x126C4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25187== by 0x1272E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25187== by 0x1222F5: main (TestCell.cpp:19) ==25187== ==25187== Open file descriptor 145: ==25187== ==25187== ==25187== Open file descriptor 142: ==25187== ==25187== ==25187== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCell_valgrind.txt ==25187== ==25187== ==25187== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25187== ==25187== ==25187== ==25187== HEAP SUMMARY: ==25187== in use at exit: 36,740 bytes in 308 blocks ==25187== total heap usage: 5,167,267 allocs, 5,166,959 frees, 488,141,751 bytes allocated ==25187== ==25187== LEAK SUMMARY: ==25187== definitely lost: 0 bytes in 0 blocks ==25187== indirectly lost: 0 bytes in 0 blocks ==25187== possibly lost: 0 bytes in 0 blocks ==25187== still reachable: 184 bytes in 4 blocks ==25187== suppressed: 36,556 bytes in 304 blocks ==25187== Reachable blocks (those to which a pointer was found) are not shown. ==25187== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25187== ==25187== For lists of detected and suppressed errors, rerun with: -s ==25187== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)